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Commit ef4dffed authored by Simeon's avatar Simeon
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import readDNAStringSet

parent de14a9b4
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NAMESPACE
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View file @ ef4dffed
...@@ -57,6 +57,7 @@ import(tidyr) ...@@ -57,6 +57,7 @@ import(tidyr)
importFrom(Biostrings,AAStringSet) importFrom(Biostrings,AAStringSet)
importFrom(Biostrings,DNAStringSet) importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,DNAStringSetList) importFrom(Biostrings,DNAStringSetList)
importFrom(Biostrings,readDNAStringSet)
importFrom(Biostrings,translate) importFrom(Biostrings,translate)
importFrom(Biostrings,writeXStringSet) importFrom(Biostrings,writeXStringSet)
importFrom(DECIPHER,AlignSeqs) importFrom(DECIPHER,AlignSeqs)
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R/cluster_longest_reading_frames.R
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...@@ -13,7 +13,7 @@ ...@@ -13,7 +13,7 @@
#' cluster_longest_reading_frames(clustered_sequences=clustered_sequences, reading_frame_tbl=reading_frame_tbl) #' cluster_longest_reading_frames(clustered_sequences=clustered_sequences, reading_frame_tbl=reading_frame_tbl)
#' #'
#' @import dplyr purrr tibble tidyr #' @import dplyr purrr tibble tidyr
#' @importFrom Biostrings DNAStringSetList #' @importFrom Biostrings DNAStringSetList readDNAStringSet
#' #'
cluster_longest_reading_frames <- function( cluster_longest_reading_frames <- function(
clustered_sequences = DNAStringSetList, # A variable that holds a list of DNA sequences that have been clustered clustered_sequences = DNAStringSetList, # A variable that holds a list of DNA sequences that have been clustered
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