Skip to content
Snippets Groups Projects
Commit 49c10b7a authored by Simeon Rossmann's avatar Simeon Rossmann
Browse files

ENA parser

parent 08ee62b6
Branches
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
ENA submission/ENA_read_submission.tsv 0 → 100644
+ 168
− 0
View file @ 49c10b7a
FileType
fastq
Read
submission
file
type
sample study instrument_model library_name library_source library_selection library_strategy library_layout forward_file_name forward_file_md5 reverse_file_name reverse_file_md5
S113 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 1-Nem_S113_L001_R1_001.fastq.gz 883cf2abe4474e7d799d03a46a6e0b70 1-Nem_S113_L001_R2_001.fastq.gz 4675059a52ab6ae54dfea13420cd8e0a
S118 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 10-Nem_S118_L001_R1_001.fastq.gz 77384b8e9636f8caea34e14f95b9695b 10-Nem_S118_L001_R2_001.fastq.gz a14d4f8a368af2fdc44d928ca242c0e5
S121 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 11-Nem_S121_L001_R1_001.fastq.gz 748247e9138340be02f7d8259651ba85 11-Nem_S121_L001_R2_001.fastq.gz a330f4748746172d5c37b3c7e5f5ac41
S124 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 12-Nem_S124_L001_R1_001.fastq.gz 11e1b65a749122685023cadf76abf428 12-Nem_S124_L001_R2_001.fastq.gz a6b839d83685788845f8a647903c6042
S127 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 13-Nem_S127_L001_R1_001.fastq.gz 4237fb65a5108c32057341af047430f8 13-Nem_S127_L001_R2_001.fastq.gz 24443bb004ea6ba4b19b7b1bb4c4e6a2
S130 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 14-Nem_S130_L001_R1_001.fastq.gz 0e1eb026af6324b06385aa9de0b942b7 14-Nem_S130_L001_R2_001.fastq.gz 4687d467410d3e17e7b54bbf4fe52aac
S133 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 15-Nem_S133_L001_R1_001.fastq.gz 21c795173960f4e8176160eaa4f01ef5 15-Nem_S133_L001_R2_001.fastq.gz f2c4e17c1260d0e5a87fbb348bdb8468
S136 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 16-Nem_S136_L001_R1_001.fastq.gz 61a2f58f5eb4a8bc4b459fd9678b1148 16-Nem_S136_L001_R2_001.fastq.gz 6646405a2438e3fffaa08da783b430e9
S115 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 17-Nem_S115_L001_R1_001.fastq.gz 7af46e45aa98447808770989de6f22c9 17-Nem_S115_L001_R2_001.fastq.gz 0ebaf0dcd99f6a24fb699a19ea26f8a0
S119 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 18-Nem_S119_L001_R1_001.fastq.gz 44cdded7dd75f5b25ddb12d6bd04eafc 18-Nem_S119_L001_R2_001.fastq.gz 815c81719c636aecb5556fec4567b82a
S117 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 2-Nem_S117_L001_R1_001.fastq.gz 203ba24549d793c2ba354c1f5c21f51e 2-Nem_S117_L001_R2_001.fastq.gz 05a967ac6aff87583161a00ff9f867ad
S120 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 3-Nem_S120_L001_R1_001.fastq.gz c14ce062461da24decd0b01a26f22d00 3-Nem_S120_L001_R2_001.fastq.gz 802c80ef3913bdffc554dbe0cf3eb455
S123 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 4-Nem_S123_L001_R1_001.fastq.gz 00356834ad5be6156bd28f297687862b 4-Nem_S123_L001_R2_001.fastq.gz 3de56f2c9b1ce65ad0770004348a0ba9
S126 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 5-Nem_S126_L001_R1_001.fastq.gz 5e6ac590566b99678b5403750ff10da7 5-Nem_S126_L001_R2_001.fastq.gz a11e0ef03eb2f8af5d52f60a9f36fc32
S129 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 6-Nem_S129_L001_R1_001.fastq.gz 9b2ccb26d2ba698921b36cdea6232c4b 6-Nem_S129_L001_R2_001.fastq.gz 823a74c81d0cfd8b995398b8bf032732
S132 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 7-Nem_S132_L001_R1_001.fastq.gz 1c70d5eff48c921a328fb29e6acbbaf0 7-Nem_S132_L001_R2_001.fastq.gz ea620d1163ffe7a65883c30ea9767322
S135 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 8-Nem_S135_L001_R1_001.fastq.gz 9f59a9b7e7da7a78eca6440dfb8dd06d 8-Nem_S135_L001_R2_001.fastq.gz 43da636bc06c6d6989e32cea4a04d43d
S114 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED 9-Nem_S114_L001_R1_001.fastq.gz bb6524f1e085f47d694428f20537d25c 9-Nem_S114_L001_R2_001.fastq.gz 68d5123135564daaa45b9dfe07c983ac
S128 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED NegativK-1-Nem_S128_L001_R1_001.fastq.gz ea4d78164f017955b8fe97305bf515b2 NegativK-1-Nem_S128_L001_R2_001.fastq.gz da100081e00c96e3d08dfda170f172c7
S131 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED NegativK-2-Nem_S131_L001_R1_001.fastq.gz 36f9ffadce1cf0055acaa5cff0f5549e NegativK-2-Nem_S131_L001_R2_001.fastq.gz d27f7128e0047a992889853b1a82b2f4
S134 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED NegativK-3-Nem_S134_L001_R1_001.fastq.gz a31d8b90167e01a1433857d94bd5e608 NegativK-3-Nem_S134_L001_R2_001.fastq.gz 423ba9088091d4dcd7d822024a3eb80c
S137 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED NegativK-4-Nem_S137_L001_R1_001.fastq.gz cd17325a3854cb4e9514d675ce6291aa NegativK-4-Nem_S137_L001_R2_001.fastq.gz e0452cb0ea35a5a5d1c29605cca0485b
S116 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED Positivkontroll-Nem_S116_L001_R1_001.fastq.gz c3d102352e8c9a62bd02c03d358bc16d Positivkontroll-Nem_S116_L001_R2_001.fastq.gz 320a4c97d85114452a45d558387a0ac6
S122 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED Vann1-Nem_S122_L001_R1_001.fastq.gz 41d503bcb8bbe7f6cc5d9858a1cc8b28 Vann1-Nem_S122_L001_R2_001.fastq.gz ebd3d2223232d09051ef21e1b061fe0c
S125 ENA_acc Illumina MiSeq NIBIO_mpt_Nems METAGENOMIC PCR AMPLICON PAIRED Vann2-Nem_S125_L001_R1_001.fastq.gz d38646eb0239141acf5cb73fe35b2c42 Vann2-Nem_S125_L001_R2_001.fastq.gz 69ab32e1d842beea872a9d337de9c14f
S57 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 1_S57_L001_R1_001.fastq.gz 8112919854b98ac8493e0ed0afd8986f 1_S57_L001_R2_001.fastq.gz 5ffea393f38a97b84d79166dc2b6c5df
S62 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 10_S62_L001_R1_001.fastq.gz 4a59cfdca73ce5637c9971a36b815281 10_S62_L001_R2_001.fastq.gz 14ae81dd77cff7d34d23f02ae9b1ed3e
S66 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 11_S66_L001_R1_001.fastq.gz eb6db5ceebb0fde8c6f701abc9e8ccff 11_S66_L001_R2_001.fastq.gz fccbababdcc315775e8889f162cfc864
S70 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 12_S70_L001_R1_001.fastq.gz 4144e09a801cd788a136f488ea8edf8d 12_S70_L001_R2_001.fastq.gz 7ebbe096e0e1bf37fa9c0e22de804e88
S74 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 13_S74_L001_R1_001.fastq.gz d524926adcf85beb304d9b6c42b37cf9 13_S74_L001_R2_001.fastq.gz e7b5f31cbaa50a053e8d65439f731d31
S77 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 14_S77_L001_R1_001.fastq.gz 902514f68665f6b0fcd55e6b3d812941 14_S77_L001_R2_001.fastq.gz d9cf23cfb3759c4abdd797c73dd2ee7d
S80 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 15_S80_L001_R1_001.fastq.gz a166eeba3d5ca17586686834203eec5c 15_S80_L001_R2_001.fastq.gz 5b2336558fcd1d2b8a18c4faea8b81ba
S83 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 16_S83_L001_R1_001.fastq.gz cdf0aa7c91bd569a719d84ddaf8655e4 16_S83_L001_R2_001.fastq.gz a86ef90b1f43b4845ca0f94b9eff6d9f
S59 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 17_S59_L001_R1_001.fastq.gz d8aa8450ec7f74f40cc13e8620409a4e 17_S59_L001_R2_001.fastq.gz 685902d3093f8a937756472f5ffc74ac
S63 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 18_S63_L001_R1_001.fastq.gz 6e80183dbd7eef4d6073d77b58234be7 18_S63_L001_R2_001.fastq.gz 2899ffe3d04b897e0e918f352e23f13b
S61 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 2_S61_L001_R1_001.fastq.gz 1fbc664ca7c4e8497485c62238d9d212 2_S61_L001_R2_001.fastq.gz fd280986b2df6179cfd4cb294fc76cd6
S65 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 3_S65_L001_R1_001.fastq.gz 22370167cf554d4497e4a3a2795901bc 3_S65_L001_R2_001.fastq.gz 14c33605d9c6a60f9464234a35e9cac6
S69 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 4_S69_L001_R1_001.fastq.gz de219fff9c244fc0d53b519f910ff423 4_S69_L001_R2_001.fastq.gz 67240f93df052010709b7d70b782b1a7
S73 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 5_S73_L001_R1_001.fastq.gz 970fd128e731f9786f1af3975e5a04c1 5_S73_L001_R2_001.fastq.gz 66144acae4f3a3d8576ccaacb1d4e616
S76 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 6_S76_L001_R1_001.fastq.gz ea3efdc2ff334580fa918a386046d499 6_S76_L001_R2_001.fastq.gz 6936dfe34ca913fbdee5bf91369794c6
S79 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 7_S79_L001_R1_001.fastq.gz faecd843179c33fae289b2b6c294bf6a 7_S79_L001_R2_001.fastq.gz 54b71c66f223126e1be7e1467f02aa55
S82 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 8_S82_L001_R1_001.fastq.gz aab27114cb85254d5b06c0cd61cfbbc5 8_S82_L001_R2_001.fastq.gz 113b2b53b6e52086a4523d19438a9922
S58 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED 9_S58_L001_R1_001.fastq.gz df7ca1154f8b5d0a3cad5e3264e14f11 9_S58_L001_R2_001.fastq.gz a6e63af2173be76fc3c6e43108d03355
S75 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED NegativK-1_S75_L001_R1_001.fastq.gz e2a4d3722281b9ec9ed6fd8af95e11d2 NegativK-1_S75_L001_R2_001.fastq.gz d884529f63a3d5d2587467100fc7632d
S78 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED NegativK-2_S78_L001_R1_001.fastq.gz ca6aa3b8d8d11535aea316e0cd26393d NegativK-2_S78_L001_R2_001.fastq.gz e040ebf09bea82eb716ce18890229a19
S81 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED NegativK-3_S81_L001_R1_001.fastq.gz 5a7a4bef73e1e76b8c50ebe52d7f7749 NegativK-3_S81_L001_R2_001.fastq.gz 751a6a0642728bb84641c943043d0352
S84 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED NegativK-4_S84_L001_R1_001.fastq.gz 4a36498da59f19379064f95bbd56a24b NegativK-4_S84_L001_R2_001.fastq.gz 28a8e5c38514f6d42215ddf5ca103ec7
S60 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED PositivK-1_S60_L001_R1_001.fastq.gz 6caacca8fdd44d0a4d0cfc46139ea13e PositivK-1_S60_L001_R2_001.fastq.gz c6658f440d8b838a44ea1eb0a77ee030
S64 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED PositivK-2_S64_L001_R1_001.fastq.gz 61af80c7985a313122df6e47f7d8cd20 PositivK-2_S64_L001_R2_001.fastq.gz 7e0027ba12b240d05274dcf8d9029728
S68 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED PositivK-3_S68_L001_R1_001.fastq.gz fbe375ac608a75a7479835865d5d48a0 PositivK-3_S68_L001_R2_001.fastq.gz 70298a45607003bf928b3e07a43ed22e
S72 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED PositivK-4_S72_L001_R1_001.fastq.gz ce9d0af519afa3d1a2ea4ea566c9c582 PositivK-4_S72_L001_R2_001.fastq.gz 55137ec8a82f5c4a082fcca4d8815aeb
S67 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED Vann1_S67_L001_R1_001.fastq.gz eb32c4c7825e14fef772d442da0b81d6 Vann1_S67_L001_R2_001.fastq.gz 6ae82d8be5fcd193812a8e7ca918ba03
S71 ENA_acc Illumina MiSeq NIBIO_mpt_16S METAGENOMIC PCR AMPLICON PAIRED Vann2_S71_L001_R1_001.fastq.gz 48f60f32739a7c4fefc158e2dd90bbab Vann2_S71_L001_R2_001.fastq.gz 75210e79d9136ce4ee9b42458c01fedc
S1 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 1-its1_S1_L001_R1_001.fastq.gz ef114cc8138e6821da72a6ac2efdb7b2 1-its1_S1_L001_R2_001.fastq.gz ef31016e0f32ae3383f2cb173e8f4e34
S6 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 10-its1_S6_L001_R1_001.fastq.gz 0cc0d71b3fdbc4caadb55dc9e3d4612b 10-its1_S6_L001_R2_001.fastq.gz 3c4603b7139b8d8925338935e486e089
S10 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 11-its1_S10_L001_R1_001.fastq.gz d8ba0bcf68350c4cf9a9d08d68c24ed0 11-its1_S10_L001_R2_001.fastq.gz be8a4997be10d79806cacc598006b03e
S14 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 12-its1_S14_L001_R1_001.fastq.gz 3e19c74fc19321c3da405b12d6a9a6b5 12-its1_S14_L001_R2_001.fastq.gz f153bed08d04ac1a66440f7abd68e911
S18 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 13-its1_S18_L001_R1_001.fastq.gz 7798499b449a89dd07050bf01fc0590d 13-its1_S18_L001_R2_001.fastq.gz 40fcaea7efe17acb352d392e47341536
S21 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 14-its1_S21_L001_R1_001.fastq.gz 45d72b27a6b87d47f9f4ffd5b574efdb 14-its1_S21_L001_R2_001.fastq.gz b7df440ecdae9e6c1e06e20483ea40dc
S24 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 15-its1_S24_L001_R1_001.fastq.gz d050e585dce0f65f18acbe332ee4fac1 15-its1_S24_L001_R2_001.fastq.gz 9ba277c56b1e741d7af428f7d6436730
S27 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 16-its1_S27_L001_R1_001.fastq.gz 7bd1697d198a5103349226a30fd57b27 16-its1_S27_L001_R2_001.fastq.gz 0938974c4b8ee8d4e00144cd926cdf21
S3 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 17-its1_S3_L001_R1_001.fastq.gz edef94dde09c7958440188a4def24c09 17-its1_S3_L001_R2_001.fastq.gz ca531c96d4e0a2af1076ec403c16035a
S7 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 18-its1_S7_L001_R1_001.fastq.gz ecb9db453baafa07ad074606a3b4f587 18-its1_S7_L001_R2_001.fastq.gz db8f93803b60c7c6d05fd9c8ab03f0a9
S5 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 2-its1_S5_L001_R1_001.fastq.gz fea7d21b3309b72ba6f07d12b1c41374 2-its1_S5_L001_R2_001.fastq.gz d5d41ceb674a10c3c01a6836c4ccdf6b
S9 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 3-its1_S9_L001_R1_001.fastq.gz 143d5d1267c20df19fbb2f6f52da60d0 3-its1_S9_L001_R2_001.fastq.gz 270464d0ff72f88bed6af48750c331e9
S13 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 4-its1_S13_L001_R1_001.fastq.gz 52cd5a31ee300bcf8bdc012d9c297001 4-its1_S13_L001_R2_001.fastq.gz cd04b7188d4c7ac8c293cbc5caa59491
S17 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 5-its1_S17_L001_R1_001.fastq.gz 8d3bedf571550a687e790758a8f4117f 5-its1_S17_L001_R2_001.fastq.gz 941e4f3a3fd1d457f6b0a304a5611aa8
S20 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 6-its1_S20_L001_R1_001.fastq.gz eeb6e5df4c7f497c7a9a1a785c282a22 6-its1_S20_L001_R2_001.fastq.gz 2ed0af374271e18e9a5dc8a90464d7f8
S23 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 7-its1_S23_L001_R1_001.fastq.gz 1eb1dfa1a551fae8f044bd60acf9148b 7-its1_S23_L001_R2_001.fastq.gz 7823e013e9ed8eb0011b20eef74189b2
S26 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 8-its1_S26_L001_R1_001.fastq.gz 98073a850e69a3c24333a68774bf5912 8-its1_S26_L001_R2_001.fastq.gz d2f00b10965ed0be3ac6aaedcf4ce9af
S2 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED 9-its1_S2_L001_R1_001.fastq.gz fd16878dbfdceb535a99aae05bb5a9cf 9-its1_S2_L001_R2_001.fastq.gz 27c05eef4d6c5996fc4f782d5ff273d9
S19 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED NegativK-1-its1_S19_L001_R1_001.fastq.gz cd6f14d4dcdcdb27f1581737341208b7 NegativK-1-its1_S19_L001_R2_001.fastq.gz cd4079ddb7067023ef16ea47d0456e43
S22 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED NegativK-2-its1_S22_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-2-its1_S22_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S25 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED NegativK-3-its1_S25_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-3-its1_S25_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S28 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED NegativK-4-its1_S28_L001_R1_001.fastq.gz 2ebc923a17d2e7fb132ec393aa7d1261 NegativK-4-its1_S28_L001_R2_001.fastq.gz 6a1fd104d3003ae08f4c2583c958c92d
S4 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED PositivK-1-its1_S4_L001_R1_001.fastq.gz 67a9dd8a27613b9f53f77c496ea5c236 PositivK-1-its1_S4_L001_R2_001.fastq.gz 6f1169035dc6a357a20aafc85d59c87a
S8 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED PositivK-2-its1_S8_L001_R1_001.fastq.gz 24873e1be9492429f831e31651e77aeb PositivK-2-its1_S8_L001_R2_001.fastq.gz fec2a90bb1b242d26462ee204bc7eb17
S12 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED PositivK-3-its1_S12_L001_R1_001.fastq.gz f0223cb8b8d94d74d0aadef1f45630eb PositivK-3-its1_S12_L001_R2_001.fastq.gz 8c172d64eff062efe7a8a789c64cc48c
S16 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED PositivK-4-its1_S16_L001_R1_001.fastq.gz 0d77cba24e4ebc266dcdc01263a94354 PositivK-4-its1_S16_L001_R2_001.fastq.gz d3bb3385c6605f008b1324c44f594c2e
S11 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED Vann1-its1_S11_L001_R1_001.fastq.gz 885cbc1276db67c27ab86988ea80f494 Vann1-its1_S11_L001_R2_001.fastq.gz f884ab0db12b5d755206711b2e69ad5d
S15 ENA_acc Illumina MiSeq NIBIO_mpt_FITS1 METAGENOMIC PCR AMPLICON PAIRED Vann2-its1_S15_L001_R1_001.fastq.gz 2fc0c2d951d285f855ad70f62c3d711e Vann2-its1_S15_L001_R2_001.fastq.gz 3a1144042982dc757cc5a5be600bf14f
S29 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 1-its2_S29_L001_R1_001.fastq.gz 1ee922a732821842e82f887c83552e4a 1-its2_S29_L001_R2_001.fastq.gz ac8bb244e7ed477c3a9af70a2059b564
S34 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 10-its2_S34_L001_R1_001.fastq.gz 25b5a1fc6e5ad09980001e5e978f0e95 10-its2_S34_L001_R2_001.fastq.gz fce4a9a308117d92f65ca43278aa1ccd
S38 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 11-its2_S38_L001_R1_001.fastq.gz 85a8e176daa77d3d6323499b90589a2c 11-its2_S38_L001_R2_001.fastq.gz 428bbda2aa534865b7f25538e28af34c
S42 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 12-its2_S42_L001_R1_001.fastq.gz 8ef650b0a22ca40ddb66aa92c13f5173 12-its2_S42_L001_R2_001.fastq.gz 4e51cb26281468f8efae0a54abeae07b
S46 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 13-its2_S46_L001_R1_001.fastq.gz 95ae51582e6dd43ce0b1db09d6efb5d3 13-its2_S46_L001_R2_001.fastq.gz b500472269925aa3ea35e8a0d41aff4c
S49 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 14-its2_S49_L001_R1_001.fastq.gz d1da6d7e75e75351d9cd916fe7333c06 14-its2_S49_L001_R2_001.fastq.gz f9216b4e43cbff0573f7989a65f06bed
S52 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 15-its2_S52_L001_R1_001.fastq.gz b02585651f9e59d2b78cf608bb251d58 15-its2_S52_L001_R2_001.fastq.gz fad367d3f8944cb8d2d4cce5050f38c2
S55 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 16-its2_S55_L001_R1_001.fastq.gz 046443a94c98a9295ceef53208d7939c 16-its2_S55_L001_R2_001.fastq.gz 5886319ec226a57bab78960a161fe89f
S31 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 17-its2_S31_L001_R1_001.fastq.gz 4d8e703de992f2e58123152ef7bdc157 17-its2_S31_L001_R2_001.fastq.gz c9d966b1df06a83e3253dcb737cee23a
S35 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 18-its2_S35_L001_R1_001.fastq.gz 1e77465537e0beb0f8905e11e3cfbeff 18-its2_S35_L001_R2_001.fastq.gz 2e414d755e45180c64ac40008ddbbd71
S33 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 2-its2_S33_L001_R1_001.fastq.gz 2685252a5bf2dcc05cd8149727c9bd9b 2-its2_S33_L001_R2_001.fastq.gz 159e294c712fe18650b4ea2194807f26
S37 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 3-its2_S37_L001_R1_001.fastq.gz d4f1df000e5f026ebb3e4946fd1c5973 3-its2_S37_L001_R2_001.fastq.gz b09a02df4b3f62350c7b81b0b27b52ee
S41 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 4-its2_S41_L001_R1_001.fastq.gz 2823f86f60c61b20fa3985b31c9480b7 4-its2_S41_L001_R2_001.fastq.gz bf6e0ef32797a86d6817fc58bd41c1e6
S45 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 5-its2_S45_L001_R1_001.fastq.gz 0e18058481bd751209907af19b916c2d 5-its2_S45_L001_R2_001.fastq.gz 20b81f343d0e19ff3bd6038dbf2ba4e3
S48 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 6-its2_S48_L001_R1_001.fastq.gz 464eaee442073de4e8bbb658350ed853 6-its2_S48_L001_R2_001.fastq.gz c365b7795e1580007c04e721ccbc05ba
S51 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 7-its2_S51_L001_R1_001.fastq.gz 479404a75325cc72fc0a6b88030826c6 7-its2_S51_L001_R2_001.fastq.gz 88221990af176422fb40d4475f870d9b
S54 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 8-its2_S54_L001_R1_001.fastq.gz 2712d0b0f3f2a53608a6a2a8a6e2347b 8-its2_S54_L001_R2_001.fastq.gz 660276972dda67804cd99bc9342708be
S30 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED 9-its2_S30_L001_R1_001.fastq.gz 02aac6a3f9f9c64055bdd4d636e2aefe 9-its2_S30_L001_R2_001.fastq.gz ef7a465ef2b79cb69dc86e52903cac60
S47 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED NegativK-1-its2_S47_L001_R1_001.fastq.gz a8688dfd2302afe4b84149127fa36d74 NegativK-1-its2_S47_L001_R2_001.fastq.gz b2a13e5c64a4d934affab0c0dc28e700
S50 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED NegativK-2-its2_S50_L001_R1_001.fastq.gz 33fe5527796580294c40b7c1f605f393 NegativK-2-its2_S50_L001_R2_001.fastq.gz 214ddc03c97a9c9a7ae9437d72ea76a6
S53 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED NegativK-3-its2_S53_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-3-its2_S53_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S56 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED NegativK-4-its2_S56_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-4-its2_S56_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S32 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED PositivK-1-its2_S32_L001_R1_001.fastq.gz 558b238785cab45dc273546dc8ef1536 PositivK-1-its2_S32_L001_R2_001.fastq.gz 115c0d6c1626c8210e485878a781c530
S36 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED PositivK-2-its2_S36_L001_R1_001.fastq.gz 14b0eee09ea37b7eb0d3bd754b60e7ec PositivK-2-its2_S36_L001_R2_001.fastq.gz f5dc2cd15b620dc77dfb1aeaa432c435
S40 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED PositivK-3-its2_S40_L001_R1_001.fastq.gz c7c3192e9c50ba70455a8635faa27078 PositivK-3-its2_S40_L001_R2_001.fastq.gz 84d28e7454aad741efafa4d1ae0c6ed4
S44 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED PositivK-4-its2_S44_L001_R1_001.fastq.gz 0b275acf44f4e36ca79e9c2e08face25 PositivK-4-its2_S44_L001_R2_001.fastq.gz 86fbc4b2a9dd1c89234bc62b14a882b0
S39 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED Vann1-its2_S39_L001_R1_001.fastq.gz 9b01247c80fa5e2b500217f7817fdcf8 Vann1-its2_S39_L001_R2_001.fastq.gz d95267fbb56fd6f8471829bc3998c631
S43 ENA_acc Illumina MiSeq NIBIO_mpt_FITS2 METAGENOMIC PCR AMPLICON PAIRED Vann2-its2_S43_L001_R1_001.fastq.gz 306deca42f1ba8dcfd0d32e98ea576f6 Vann2-its2_S43_L001_R2_001.fastq.gz 4467fa3dfd2e204ed355a7d4971cd19e
S85 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 1-oits_S85_L001_R1_001.fastq.gz 0b16c66ab6876efbed92c8699eb006ec 1-oits_S85_L001_R2_001.fastq.gz 47a733156b8b2dca2db13f7da92fc126
S90 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 10-oits_S90_L001_R1_001.fastq.gz 277d0f3c0933149d8ef64e962f663c97 10-oits_S90_L001_R2_001.fastq.gz 37ac9060094a777b547a82cb9a3872c9
S94 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 11-oits_S94_L001_R1_001.fastq.gz cf03a1c8122e8bec3a1cdec5e9958661 11-oits_S94_L001_R2_001.fastq.gz 0831f58d3a78c378cb4ba8d641eedaf7
S98 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 12-oits_S98_L001_R1_001.fastq.gz 9244dbac83d41532d8fe966990260fe1 12-oits_S98_L001_R2_001.fastq.gz 6f12c1a56932d29da837b19aaee21596
S102 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 13-oits_S102_L001_R1_001.fastq.gz 8b235f8c878bb467f91851fc0d2a7ef0 13-oits_S102_L001_R2_001.fastq.gz 71959cf0539ef3b096c54d529cb02a57
S105 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 14-oits_S105_L001_R1_001.fastq.gz fbff37d79565f0ec21a9ee657e7f8b5a 14-oits_S105_L001_R2_001.fastq.gz 3585e390783ba1795f0b15f380e0799c
S108 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 15-oits_S108_L001_R1_001.fastq.gz 024abc360bd05d0589d5c197ad840d7d 15-oits_S108_L001_R2_001.fastq.gz 65bde53c23814d9b5c70271a4d21a042
S111 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 16-oits_S111_L001_R1_001.fastq.gz 6b4beb68e186818ef72e730cd3cd73b1 16-oits_S111_L001_R2_001.fastq.gz a718034190edd4a2538127dd2c69a3d7
S87 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 17-oits_S87_L001_R1_001.fastq.gz c67928e91d3cad7a4f4bcf7c64fba328 17-oits_S87_L001_R2_001.fastq.gz facbc443023d9695107596028fe732f2
S91 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 18-oits_S91_L001_R1_001.fastq.gz 8f45475db120f3fedab6970f83f73fe5 18-oits_S91_L001_R2_001.fastq.gz eb098228a4feae01eeb02dc40384d445
S89 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 2-oits_S89_L001_R1_001.fastq.gz 67cc4ace6dcf616774e8d3a96929e8ed 2-oits_S89_L001_R2_001.fastq.gz 6505328511da131f53f27e05c76a69ab
S93 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 3-oits_S93_L001_R1_001.fastq.gz 536895fa70dde00b5070f8b74a1facd4 3-oits_S93_L001_R2_001.fastq.gz 3e9e681ede49604061e03b13ca6eb763
S97 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 4-oits_S97_L001_R1_001.fastq.gz decd008b1dc3881fb43b5d9c27d17466 4-oits_S97_L001_R2_001.fastq.gz 2e11e3bd8c17ec26597b12835bf31186
S101 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 5-oits_S101_L001_R1_001.fastq.gz ef524af22c9eebbb98b7cc9749adda8d 5-oits_S101_L001_R2_001.fastq.gz fcfff4dc40ce2a63bd43223172d127f4
S104 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 6-oits_S104_L001_R1_001.fastq.gz 3e566297219f81e8a4893178c5c656a2 6-oits_S104_L001_R2_001.fastq.gz a66220f8e017ccdf5a175de88edbdb54
S107 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 7-oits_S107_L001_R1_001.fastq.gz 0b2c93f30e7c9e606f17c5b46a1f2833 7-oits_S107_L001_R2_001.fastq.gz b835ce1b773fbc4e8eb303800523341c
S110 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 8-oits_S110_L001_R1_001.fastq.gz 5d28dc3df04006af4941cb50c47c6781 8-oits_S110_L001_R2_001.fastq.gz d4da6d1e5b34a992eee721e8cf37ce75
S86 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED 9-oits_S86_L001_R1_001.fastq.gz f42fd885583d414a751b7572d0ef093f 9-oits_S86_L001_R2_001.fastq.gz fb5c802bd19be5a20e7a1168dcb60d93
S103 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED NegativK-1-oits_S103_L001_R1_001.fastq.gz 3f82ff93442c878d2ad90e0b628ad556 NegativK-1-oits_S103_L001_R2_001.fastq.gz d8463eae1654beda2602084eded1b439
S106 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED NegativK-2-oits_S106_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-2-oits_S106_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S109 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED NegativK-3-oits_S109_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-3-oits_S109_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S112 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED NegativK-4-oits_S112_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d NegativK-4-oits_S112_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S88 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED PositivK-1-oits_S88_L001_R1_001.fastq.gz c6fd9a25f3d128fec2459fefc83d98e5 PositivK-1-oits_S88_L001_R2_001.fastq.gz 83e2fdf3a66ab77b64a3b7e45191c4b7
S92 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED PositivK-2-oits_S92_L001_R1_001.fastq.gz baf2b7081656267996f5e1184e69e8b4 PositivK-2-oits_S92_L001_R2_001.fastq.gz e8e474aaf36e3eb9fb6d2d5005d993ed
S96 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED PositivK-3-oits_S96_L001_R1_001.fastq.gz 14b0914da257b1562e43d38111f45dab PositivK-3-oits_S96_L001_R2_001.fastq.gz 987ea87111e92357527d4bd786963fb9
S100 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED PositivK-4-oits_S100_L001_R1_001.fastq.gz 2d1b2458977257c4261513e11e15b8b0 PositivK-4-oits_S100_L001_R2_001.fastq.gz 4254bd01c49f58b0b8b7d2e62d4029e1
S95 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED Vann1-oits_S95_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d Vann1-oits_S95_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S99 ENA_acc Illumina MiSeq NIBIO_mpt_OITS METAGENOMIC PCR AMPLICON PAIRED Vann2-oits_S99_L001_R1_001.fastq.gz 86f290417b56aad7ac49c2da8caa4ac6 Vann2-oits_S99_L001_R2_001.fastq.gz 4f72fff254ab9bc1dcbe69b2121e64e4
S138 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 1-trich_S138_L001_R1_001.fastq.gz fe314f289132b67761840949abf71a8f 1-trich_S138_L001_R2_001.fastq.gz 62700cb3fcec4ed25bf2c435fcebc0b6
S142 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 10-trich_S142_L001_R1_001.fastq.gz 5554cd39b2a6d8b0d555c633ed2cc642 10-trich_S142_L001_R2_001.fastq.gz f8f2a61c841e11f98370aaf6a62e1540
S145 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 11-trich_S145_L001_R1_001.fastq.gz e26bffabf070249385cad17f4403d4f2 11-trich_S145_L001_R2_001.fastq.gz 3f84e7e350e3c066d3fb3f8b3bb068ba
S148 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 12-trich_S148_L001_R1_001.fastq.gz bbbcb50965c71d52fe12f4c9635e1e58 12-trich_S148_L001_R2_001.fastq.gz 441a56ea1369c6ab99e42edf92dd49ad
S151 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 13-trich_S151_L001_R1_001.fastq.gz 4c6869df04044710babcd6e27a12d699 13-trich_S151_L001_R2_001.fastq.gz d09f767a9cd4d071886adb15f0407ea0
S154 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 14-trich_S154_L001_R1_001.fastq.gz 7534e00d45c3da4bedc52083711e62aa 14-trich_S154_L001_R2_001.fastq.gz 28f8fe909a37ac17aa382dc05737bb9f
S157 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 15-trich_S157_L001_R1_001.fastq.gz 7b3e3fef5df23cfc5206f310029a4789 15-trich_S157_L001_R2_001.fastq.gz 9f53981e0b799f158f7f5973e05f0cb8
S160 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 16-trich_S160_L001_R1_001.fastq.gz 67621f7d5ece72cd9e42af676c6c90fd 16-trich_S160_L001_R2_001.fastq.gz bb4ef52452c14d4667c092f227a5381f
S140 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 17-trich_S140_L001_R1_001.fastq.gz fa506beb0cf50ddf3fe54b990ba4b861 17-trich_S140_L001_R2_001.fastq.gz 35f728f1df790ecc266d4d043dbac9c7
S143 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 18-trich_S143_L001_R1_001.fastq.gz 994722e46db077dccdfa6e1053348c1f 18-trich_S143_L001_R2_001.fastq.gz 6541105ea4d9174b9714fb0d5f3f6b6c
S141 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 2-trich_S141_L001_R1_001.fastq.gz dbe4ca4cf3b1e51eb534c62367e3744c 2-trich_S141_L001_R2_001.fastq.gz 709220d1ef96142f35eea4b8cf864969
S144 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 3-trich_S144_L001_R1_001.fastq.gz 27fc5181b91efde3e66876ffd8289d5d 3-trich_S144_L001_R2_001.fastq.gz 843d5ba534e3b4999fac2e56f5884f7e
S147 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 4-trich_S147_L001_R1_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d 4-trich_S147_L001_R2_001.fastq.gz 3882b35ad415f3186dbda9f127ebc86d
S150 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 5-trich_S150_L001_R1_001.fastq.gz 1f6ef3dd794625321c1db50b9338b74f 5-trich_S150_L001_R2_001.fastq.gz 29d9588e3aff31f8d93f55109a7e0741
S153 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 6-trich_S153_L001_R1_001.fastq.gz 348201ff9b2ffcc4e15d9c936ff6b53f 6-trich_S153_L001_R2_001.fastq.gz 6dcd62e3c30171e5d67853c7c84c0aac
S156 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 7-trich_S156_L001_R1_001.fastq.gz a3810118b994038d0bb587483a5c3229 7-trich_S156_L001_R2_001.fastq.gz 119f1df860bcd6f727ff7d7c77732ec9
S159 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 8-trich_S159_L001_R1_001.fastq.gz 61608d1193af2f693ef3d0e46c4acd68 8-trich_S159_L001_R2_001.fastq.gz 19feaf61b78e695b66b977bda2e87dff
S139 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED 9-trich_S139_L001_R1_001.fastq.gz 8b424b4e3c04fe304c58a857b9d0c459 9-trich_S139_L001_R2_001.fastq.gz e8020df2c53bdfd857600c61ec9ef5d7
S152 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED PositivK-1-trich_S152_L001_R1_001.fastq.gz 0d7999da9f0130aa6d7b6b1054ba0e8d PositivK-1-trich_S152_L001_R2_001.fastq.gz 49e932f26fb8182414811e69a4eb2212
S155 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED PositivK-2-trich_S155_L001_R1_001.fastq.gz f6be23b9b4303c3d8a7c52985dc78474 PositivK-2-trich_S155_L001_R2_001.fastq.gz f9561692898b7aeae790fd4d47e3b667
S158 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED PositivK-3-trich_S158_L001_R1_001.fastq.gz 42ea9997fffe2b751c2f557624f20dc3 PositivK-3-trich_S158_L001_R2_001.fastq.gz 91787b49d2d2a10c5e8da08fe93a459f
S161 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED PositivK-4-trich_S161_L001_R1_001.fastq.gz 4e6f0a00ea72129fb477c0cdb9eea723 PositivK-4-trich_S161_L001_R2_001.fastq.gz bfc4f0332f94372cd1ce0c94c18780f7
S146 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED Vann1-trich_S146_L001_R1_001.fastq.gz f99c57ac13effdc08ce68baac71b19b5 Vann1-trich_S146_L001_R2_001.fastq.gz ff4e9089eda9ee8c1d0bbf98024680d5
S149 ENA_acc Illumina MiSeq NIBIO_mpt_Trich METAGENOMIC PCR AMPLICON PAIRED Vann2-trich_S149_L001_R1_001.fastq.gz ee66a55711f7b00441ddc891b6621825 Vann2-trich_S149_L001_R2_001.fastq.gz a69cb82fe85f4ec9c2d40e9e9de08148
ENA submission/ena_parser.Rmd
+ 7
− 0
View file @ 49c10b7a
...@@ -66,4 +66,11 @@ markers <- c("Nems", ...@@ -66,4 +66,11 @@ markers <- c("Nems",
tb <- lapply(markers, file_reader) %>% tb <- lapply(markers, file_reader) %>%
bind_rows() bind_rows()
### Fuse back to template to make sure all column names are identical
tbl <- right_join(tbl, tb)
all.equal(as.data.frame(tbl), as.data.frame(tb))
writeLines(header, "ENA_read_submission.tsv")
write_tsv(tbl, "ENA_read_submission.tsv", append = TRUE, col_names = TRUE)
``` ```
\ No newline at end of file
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment