Working minimal test

.gitignore

Mid_test_data/MidP1831_erik.fsa

Mid_test_data/MidP1831_erik.gff

...ata/nextflow_results/MidP1831_erik_em.emapper.annotations

Mid_test_data/nextflow_results/MidP1831_erik_em.emapper.hits

.../nextflow_results/MidP1831_erik_em.emapper.seed_orthologs

Mid_test_data/nextflow_results/MidP1831_erik_interpro.gff3

Mid_test_data/nextflow_results/MidP1831_erik_interpro.json

Mid_test_data/nextflow_results/MidP1831_erik_interpro.tsv

Mid_test_data/nextflow_results/MidP1831_erik_interpro.xml

Mid_test_data/nextflow_results/MidP1831_erik_protein.fa

Mid_test_data/nextflow_results/fixed.gff

Mid_test_data/template.sbt

Min_test_data/MinP1831_erik.fsa

Min_test_data/MinP1831_erik.gff

Min_test_data/template.sbt

fasta_reducer.rmd

nextflow.config

pinf_genome_annotation.nf