First commit

.gitignore

+target/
+classes/

nb-configuration.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<project-shared-configuration>
+    <!--
+This file contains additional configuration written by modules in the NetBeans IDE.
+The configuration is intended to be shared among all the users of project and
+therefore it is assumed to be part of version control checkout.
+Without this configuration present, some functionality in the IDE may be limited or fail altogether.
+-->
+    <properties xmlns="http://www.netbeans.org/ns/maven-properties-data/1">
+        <!--
+Properties that influence various parts of the IDE, especially code formatting and the like. 
+You can copy and paste the single properties, into the pom.xml file and the IDE will pick them up.
+That way multiple projects can share the same settings (useful for formatting rules for example).
+Any value defined here will override the pom.xml file value but is only applicable to the current project.
+-->
+        <netbeans.hint.license>nibio_open_source_license.ftl</netbeans.hint.license>
+    </properties>
+</project-shared-configuration>

pom.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <groupId>no.nibio.vips.model</groupId>
+    <artifactId>PsilaRosaeTempModel</artifactId>
+    <version>1.0-SNAPSHOT</version>
+    <packaging>jar</packaging>
+    <dependencies>
+        <dependency>
+            <groupId>no.nibio.vips.common</groupId>
+            <artifactId>VIPSCommon</artifactId>
+            <version>1.0-SNAPSHOT</version>
+        </dependency>
+        <dependency>
+            <groupId>junit</groupId>
+            <artifactId>junit</artifactId>
+            <version>4.12</version>
+            <scope>test</scope>
+        </dependency>
+        <dependency>
+            <groupId>org.hamcrest</groupId>
+            <artifactId>hamcrest-core</artifactId>
+            <version>1.3</version>
+            <scope>test</scope>
+        </dependency>
+    </dependencies>
+    <properties>
+        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+        <maven.compiler.source>1.7</maven.compiler.source>
+        <maven.compiler.target>1.7</maven.compiler.target>
+    </properties>
+</project>
\ No newline at end of file

src/main/java/no/nibio/vips/model/psilarosaetempmodel/DataMatrix.java

+/*
+ * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. 
+ * 
+ * This file is part of PsilaRosaeTempModel.
+ * PsilaRosaeTempModel is free software: you can redistribute it and/or modify
+ * it under the terms of the NIBIO Open Source License as published by 
+ * NIBIO, either version 1 of the License, or (at your option) any
+ * later version.
+ * 
+ * PsilaRosaeTempModel is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * NIBIO Open Source License for more details.
+ * 
+ * You should have received a copy of the NIBIO Open Source License
+ * along with PsilaRosaeTempModel.  If not, see <http://www.nibio.no/licenses/>.
+ * 
+ */
+
+package no.nibio.vips.model.psilarosaetempmodel;
+
+import no.nibio.vips.util.DateMap;
+
+/**
+ * @copyright 2016 <a href="http://www.nibio.no/">NIBIO</a>
+ * @author Tor-Einar Skog <tor-einar.skog@nibio.no>
+ */
+public class DataMatrix extends DateMap{
+    public final static String TMD = "TMD";
+    public final static String TMD5C = "TMD5C";
+    public final static String TMDD5C = "TMDD5C";
+}

src/main/java/no/nibio/vips/model/psilarosaetempmodel/PsilaRosaeTempModel.java

+/*
+ * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. 
+ * 
+ * This file is part of PsilaRosaeTempModel.
+ * PsilaRosaeTempModel is free software: you can redistribute it and/or modify
+ * it under the terms of the NIBIO Open Source License as published by 
+ * NIBIO, either version 1 of the License, or (at your option) any
+ * later version.
+ * 
+ * PsilaRosaeTempModel is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * NIBIO Open Source License for more details.
+ * 
+ * You should have received a copy of the NIBIO Open Source License
+ * along with PsilaRosaeTempModel.  If not, see <http://www.nibio.no/licenses/>.
+ * 
+ */
+
+package no.nibio.vips.model.psilarosaetempmodel;
+
+import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.databind.ObjectMapper;
+import java.text.DecimalFormat;
+import java.util.ArrayList;
+import java.util.Calendar;
+import java.util.Date;
+import java.util.List;
+import java.util.TimeZone;
+import no.nibio.vips.entity.ModelConfiguration;
+import no.nibio.vips.entity.Result;
+import no.nibio.vips.entity.ResultImpl;
+import no.nibio.vips.entity.WeatherObservation;
+import no.nibio.vips.i18n.I18nImpl;
+import no.nibio.vips.model.ConfigValidationException;
+import no.nibio.vips.model.Model;
+import no.nibio.vips.model.ModelExcecutionException;
+import no.nibio.vips.model.ModelId;
+import no.nibio.vips.util.CommonNamespaces;
+import no.nibio.vips.util.InvalidAggregationTypeException;
+import no.nibio.vips.util.WeatherElements;
+import no.nibio.vips.util.WeatherObservationListException;
+import no.nibio.vips.util.WeatherUtil;
+
+/**
+ * @copyright 2016 <a href="http://www.nibio.no/">NIBIO</a>
+ * @author Tor J. Johansen <tor.johansen@nibio.no> (Model research)
+ * @author Tor-Einar Skog <tor-einar.skog@nibio.no> (Programming)
+ */
+public class PsilaRosaeTempModel extends I18nImpl implements Model {
+
+    public final static ModelId MODEL_ID = new ModelId("PSILARTEMP");
+
+    private TimeZone timeZone;
+    private DataMatrix dataMatrix;
+    private List<WeatherObservation> TM; // Temporary storage of hourly values
+    private final Double dayDegreeBaseTemp = 5.0;
+    
+    // Threshold values
+    private final Double THRESHOLD_1 = 260.0;
+    private final Double THRESHOLD_2 = 360.0;
+    private final Double THRESHOLD_3 = 560.0;
+    
+    public PsilaRosaeTempModel()
+    {
+        super("no.nibio.vips.model.psilarosaetempmodel.texts");
+    }
+
+    @Override
+    public List<Result> getResult() throws ModelExcecutionException {
+       this.calculateTemperatureSum(DataMatrix.TMD, DataMatrix.TMDD5C);
+       
+       List<Result> retVal = new ArrayList<>();
+       Date currentDate = this.dataMatrix.getFirstDateWithParameterValue(DataMatrix.TMDD5C);
+       Calendar cal = Calendar.getInstance(this.timeZone);
+       DecimalFormat dFormat = new DecimalFormat("###.##");
+       
+       while(this.dataMatrix.getParamDoubleValueForDate(currentDate, DataMatrix.TMDD5C) != null)
+       {
+           Result result = new ResultImpl();
+           result.setResultValidTime(currentDate);
+           Double TMCurrentDate = ((WeatherObservation) this.dataMatrix.getParamValueForDate(currentDate, DataMatrix.TMD)).getValue();
+           Double TMD5C = this.dataMatrix.getParamDoubleValueForDate(currentDate, DataMatrix.TMD5C);
+           Double TMDD5C = this.dataMatrix.getParamDoubleValueForDate(currentDate, DataMatrix.TMDD5C);
+           
+           result.setValue(CommonNamespaces.NS_WEATHER, DataMatrix.TMD, dFormat.format(TMCurrentDate));
+           result.setValue(CommonNamespaces.NS_WEATHER, DataMatrix.TMDD5C, dFormat.format(TMDD5C));
+           result.setValue(CommonNamespaces.NS_WEATHER, DataMatrix.TMD5C, dFormat.format(TMD5C));
+           result.setValue(PsilaRosaeTempModel.MODEL_ID.toString(), "THRESHOLD_1", dFormat.format(this.THRESHOLD_1));
+           result.setValue(PsilaRosaeTempModel.MODEL_ID.toString(), "THRESHOLD_2", dFormat.format(this.THRESHOLD_2));
+           result.setValue(PsilaRosaeTempModel.MODEL_ID.toString(), "THRESHOLD_3", dFormat.format(this.THRESHOLD_3));
+           
+           
+           Integer warningStatus = Result.WARNING_STATUS_NO_RISK;
+           if(TMDD5C >= this.THRESHOLD_1)
+           {
+               warningStatus = Result.WARNING_STATUS_MINOR_RISK;
+           }
+           if(TMDD5C >= this.THRESHOLD_2)
+           {
+               warningStatus = Result.WARNING_STATUS_HIGH_RISK;
+           }
+           if(TMDD5C >= this.THRESHOLD_3)
+           {
+               warningStatus = Result.WARNING_STATUS_NO_WARNING;
+           }
+           result.setWarningStatus(warningStatus);
+           retVal.add(result);
+           // Moving on...
+           cal.setTime(currentDate);
+           cal.add(Calendar.DATE, 1);
+           currentDate = cal.getTime();
+       }
+       
+        return retVal;
+    }
+
+    @Override
+    public ModelId getModelId() {
+        return PsilaRosaeTempModel.MODEL_ID;
+    }
+
+    @Override
+    public String getModelName() {
+        return this.getModelName(Model.DEFAULT_LANGUAGE);
+    }
+
+    @Override
+    public String getModelName(String language) {
+        return this.getText("name", language);
+    }
+
+    @Override
+    public String getLicense() {
+        return "Copyright (c) 2015 NIBIO <http://www.nibio.no/>. \n" +
+            "\n" +
+            "This file is part of PsilaRosaeTempModel. \n" + 
+            "PsilaRosaeTempModel is free software: you can redistribute it and/or modify \n" + 
+            "it under the terms of the NIBIO Open Source License as published by \n" + 
+            "NIBIO, either version 1 of the License, or (at your option) any \n" +
+            "later version. \n" +
+            "\n" +
+            "PsilaRosaeTempModel is distributed in the hope that it will be useful, \n" +
+            "but WITHOUT ANY WARRANTY; without even the implied warranty of \n" +
+            "MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the \n" +
+            "NIBIO Open Source License for more details. \n" +
+            "" +
+            "You should have received a copy of the NIBIO Open Source License \n" +
+            "along with PsilaRosaeTempModel.  If not, see <http://www.nibio.no/licenses/>. \n";
+    }
+
+    @Override
+    public String getCopyright() {
+        return "(c) 2016 NIBIO (http://www.nibio.no/). Contact: post@nibio.no";
+    }
+
+    @Override
+    public String getModelDescription() {
+        return this.getModelDescription(Model.DEFAULT_LANGUAGE);
+    }
+
+    @Override
+    public String getModelDescription(String language) {
+        return this.getText("description", language);
+    }
+
+    @Override
+    public String getWarningStatusInterpretation() {
+        return this.getWarningStatusInterpretation(Model.DEFAULT_LANGUAGE);
+    }
+
+    @Override
+    public String getWarningStatusInterpretation(String language) {
+        return this.getText("statusInterpretation", language);
+    }
+
+    @Override
+    public String getModelUsage() {
+        return this.getModelUsage(Model.DEFAULT_LANGUAGE);
+    }
+
+    @Override
+    public String getModelUsage(String language) {
+        return this.getText("usage", language);
+    }
+
+    @Override
+    public String getSampleConfig() {
+        return  "{\n" +
+                "\t\"loginInfo\":{\n" +
+                "\t\t\"username\":\"example\",\n" +
+                "\t\t\"password\":\"example\"\n" +
+                "\t},\n" +
+                "\t\"modelId\":\"" + MODEL_ID.toString() + "\",\n" +
+                "\t\"configParameters\":{\n" +
+                "\t\t\"observations\":[\n" +
+                "\t\t{\n" +
+                "\t\t\t\t\"timeMeasured\": \"2015-01-01T00:00:00+02:00\",\n" +
+                "\t\t\t\t\"elementMeasurementTypeId\":\"TM\",\n" +
+                "\t\t\t\t\"logIntervalId\":2,\n" +
+                "\t\t\t\t\"value\":-1.1\n" +
+                "\t\t}\n" +
+                "}\n";
+    }
+
+    @Override
+    public void setConfiguration(ModelConfiguration config) throws ConfigValidationException {
+        // Initialize the weather data collections
+        this.TM = new ArrayList<>();
+
+        // Init data matrix
+        this.dataMatrix = new DataMatrix();
+        
+        ObjectMapper mapper = new ObjectMapper();
+        
+        // Setting timezone
+        this.timeZone = TimeZone.getTimeZone((String) config.getConfigParameter("timeZone"));
+        //System.out.println("TimeZone=" + this.timeZone);
+        
+        // Importing weather data, creating collections
+        // Can accept both hourly and daily data
+        WeatherUtil wUtil = new WeatherUtil();
+        List<WeatherObservation> observations = mapper.convertValue(config.getConfigParameter("observations"), new TypeReference<List<WeatherObservation>>(){});
+        for(WeatherObservation o:observations)
+        {
+            switch(o.getElementMeasurementTypeId())
+            {
+                case WeatherElements.TEMPERATURE_MEAN:
+                    if(o.getLogIntervalId().equals(WeatherObservation.LOG_INTERVAL_ID_1H))
+                    {
+                        this.TM.add(o);
+                    }else {
+                        o.setTimeMeasured(wUtil.pragmaticAdjustmentToMidnight(o.getTimeMeasured(), timeZone));
+                        this.dataMatrix.setParamValueForDate(o.getTimeMeasured(), DataMatrix.TMD, o);
+                    }break;
+                default:
+                    // Keep calm and continue importing data
+                    break;
+            }
+        }
+        
+        // If we've received hourly weather data, create and store daily values
+        // Air temperature
+        if(dataMatrix.getFirstDateWithParameterValue(DataMatrix.TMD) == null)
+        {
+            try {
+                List<WeatherObservation> dailyTemperatures = new WeatherUtil().getAggregatedDailyValues(
+                        this.TM,
+                        this.timeZone,
+                        15,
+                        WeatherUtil.AGGREGATION_TYPE_AVERAGE);
+                for(WeatherObservation obs:dailyTemperatures)
+                {
+                    this.dataMatrix.setParamValueForDate(obs.getTimeMeasured(), DataMatrix.TMD, obs);
+                }
+            } catch (WeatherObservationListException | InvalidAggregationTypeException ex) {
+                throw new ConfigValidationException(ex.getMessage());
+            }
+        }
+        
+        //System.out.println("DataMatrix");
+        //System.out.println(this.dataMatrix.toString());
+    }
+
+    /**
+     * Operates on the datamatrix
+     * @param inputParameterName the parameter to sum
+     * @param outputParameterName the result
+     */
+    private void calculateTemperatureSum(String inputParameterName, String outputParameterName) throws ModelExcecutionException {
+        Date today = this.dataMatrix.getFirstDateWithParameterValue(inputParameterName);
+        Date lastDate = this.dataMatrix.getLastDateWithParameterValue(inputParameterName);
+        Calendar cal = Calendar.getInstance(this.timeZone);
+        
+        Double sum = 0.0;
+        while(today.compareTo(lastDate) <= 0)
+        {
+            WeatherObservation todayTemp = (WeatherObservation)this.dataMatrix.getParamValueForDate(today, inputParameterName);
+            if(todayTemp == null)
+            {
+                throw new ModelExcecutionException("Missing weather data at " + today + ": " + inputParameterName);
+            }
+            //System.out.println("today=" + today + ",todayTemp=" + todayTemp);
+            Double dailyContribution = Math.max(0.0, todayTemp.getValue() - this.dayDegreeBaseTemp);
+            this.dataMatrix.setParamDoubleValueForDate(today, DataMatrix.TMD5C, dailyContribution);
+            sum += dailyContribution;
+            this.dataMatrix.setParamDoubleValueForDate(today, outputParameterName, sum);
+            cal.setTime(today);
+            cal.add(Calendar.DATE, 1);
+            today = cal.getTime();
+        }
+    }
+
+}

src/main/resources/no/nibio/vips/model/psilarosaetempmodel/texts.properties

+# Copyright (c) 2016 NIBIO <http://www.nibio.no/>. 
+# 
+# This file is part of LygusRugulipennisModel.
+# LygusRugulipennisModel is free software: you can redistribute it and/or modify
+# it under the terms of the NIBIO Open Source License as published by 
+# NIBIO, either version 1 of the License, or (at your option) any
+# later version.
+# 
+# LygusRugulipennisModel is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# NIBIO Open Source License for more details.
+# 
+# You should have received a copy of the NIBIO Open Source License
+# along with LygusRugulipennisModel.  If not, see <http://www.nibio.no/licenses/>.
+# 
+
+name=Psila rosae temperature model
+usage=TODO
+statusInterpretation=TODO
+description=TODO

src/main/resources/no/nibio/vips/model/psilarosaetempmodel/texts_nb.properties

+# Copyright (c) 2016 NIBIO <http://www.nibio.no/>. 
+# 
+# This file is part of LygusRugulipennisModel.
+# LygusRugulipennisModel is free software: you can redistribute it and/or modify
+# it under the terms of the NIBIO Open Source License as published by 
+# NIBIO, either version 1 of the License, or (at your option) any
+# later version.
+# 
+# LygusRugulipennisModel is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# NIBIO Open Source License for more details.
+# 
+# You should have received a copy of the NIBIO Open Source License
+# along with LygusRugulipennisModel.  If not, see <http://www.nibio.no/licenses/>.
+# 
+
+name=Gulrotflue-svermetidspunktmodell
+usage=TODO
+statusInterpretation=TODO
+description=TODO

src/test/java/no/nibio/vips/model/psilarosaetempmodel/PsilaRosaeTempModelTest.java

+/*
+ * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. 
+ * 
+ * This file is part of PsilaRosaeTempModel.
+ * PsilaRosaeTempModel is free software: you can redistribute it and/or modify
+ * it under the terms of the NIBIO Open Source License as published by 
+ * NIBIO, either version 1 of the License, or (at your option) any
+ * later version.
+ * 
+ * PsilaRosaeTempModel is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * NIBIO Open Source License for more details.
+ * 
+ * You should have received a copy of the NIBIO Open Source License
+ * along with PsilaRosaeTempModel.  If not, see <http://www.nibio.no/licenses/>.
+ * 
+ */
+package no.nibio.vips.model.psilarosaetempmodel;
+
+import com.fasterxml.jackson.core.JsonFactory;
+import com.fasterxml.jackson.core.JsonParser;
+import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.databind.JsonNode;
+import com.fasterxml.jackson.databind.MappingJsonFactory;
+import com.fasterxml.jackson.databind.ObjectMapper;
+import java.io.BufferedInputStream;
+import java.io.IOException;
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.Date;
+import java.util.List;
+import static junit.framework.Assert.fail;
+import no.nibio.vips.entity.ModelConfiguration;
+import no.nibio.vips.entity.Result;
+import no.nibio.vips.entity.WeatherObservation;
+import no.nibio.vips.model.ModelId;
+import org.junit.After;
+import org.junit.AfterClass;
+import org.junit.Before;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import static org.junit.Assert.*;
+
+/**
+ *
+ * @author treinar
+ */
+public class PsilaRosaeTempModelTest {
+    
+    public PsilaRosaeTempModelTest() {
+    }
+    
+    @BeforeClass
+    public static void setUpClass() {
+    }
+    
+    @AfterClass
+    public static void tearDownClass() {
+    }
+    
+    @Before
+    public void setUp() {
+    }
+    
+    @After
+    public void tearDown() {
+    }
+
+    /**
+     * Test of getResult method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetResult() throws Exception {
+        System.out.println("getResult");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        ModelConfiguration config = this.getConfiguration("/2015_aas_TMD.json");
+        instance.setConfiguration(config);
+        List<Result> result = instance.getResult();
+        assertNotNull(result);
+        
+        Collections.sort(result);
+        /*
+        System.out.println("Result.size=" + result.size());
+        for(Result r:result)
+        {
+            System.out.println(r.toString());
+        }*/
+    }
+
+    /**
+     * Test of getModelId method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetModelId() {
+        System.out.println("getModelId");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        ModelId result = instance.getModelId();
+        ModelId expResult= new ModelId("PSILARTEMP");
+        assertEquals(expResult.toString(),result.toString());
+        
+        
+       
+    }
+
+    /**
+     * Test of getModelName method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetModelName_0args() {
+        System.out.println("getModelName");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getModelName();
+        assertNotNull(result);
+    }
+
+    /**
+     * Test of getLicense method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetLicense() {
+        System.out.println("getLicense");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getLicense();
+        assertNotNull(result);
+    }
+
+    /**
+     * Test of getCopyright method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetCopyright() {
+        System.out.println("getCopyright");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getCopyright();
+        assertNotNull(result);
+    }
+
+    /**
+     * Test of getModelDescription method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetModelDescription_0args() {
+        System.out.println("getModelDescription");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getModelDescription();
+        assertNotNull(result);
+    }
+
+    
+
+    /**
+     * Test of getWarningStatusInterpretation method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetWarningStatusInterpretation_0args() {
+        System.out.println("getWarningStatusInterpretation");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getWarningStatusInterpretation();
+        assertNotNull(result);
+    }
+
+    /**
+     * Test of getModelUsage method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetModelUsage_0args() {
+        System.out.println("getModelUsage");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getModelUsage();
+        assertNotNull(result);
+    }
+
+    
+    /**
+     * Test of getSampleConfig method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testGetSampleConfig() {
+        System.out.println("getSampleConfig");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        String result = instance.getSampleConfig();
+        assertNotNull(result);
+    }
+
+    /**
+     * Test of setConfiguration method, of class PsilaRosaeTempModel.
+     */
+    @Test
+    public void testSetConfiguration() throws Exception {
+        System.out.println("setConfiguration");
+        ModelConfiguration config = this.getConfiguration("/2015_aas_TMD.json");
+        PsilaRosaeTempModel instance = new PsilaRosaeTempModel();
+        instance.setConfiguration(config);
+    }
+ 
+    private ModelConfiguration getConfiguration(String fileName)
+    {
+        try {
+            ModelConfiguration config = new ModelConfiguration();
+            config.setModelId(PsilaRosaeTempModel.MODEL_ID.toString());
+            
+            
+            config.setConfigParameter("timeZone", "Europe/Oslo");
+            BufferedInputStream inputStream = new BufferedInputStream(this.getClass().getResourceAsStream(fileName));
+            JsonFactory f = new MappingJsonFactory();
+            JsonParser jp = f.createParser(inputStream);
+            JsonNode all = jp.readValueAsTree();
+            List<WeatherObservation> observations = new ArrayList<>();
+            ObjectMapper mapper = new ObjectMapper();
+
+            Date firstDate = null;
+            Date lastDate = null;
+            if(all.isArray())
+            {
+                for(JsonNode node : all){
+                    Date timeMeasured = (Date)mapper.convertValue(node.get("timeMeasured").asText(), new TypeReference<Date>(){});
+                    if(firstDate == null || firstDate.compareTo(timeMeasured) > 0)
+                    {
+                        firstDate = timeMeasured;
+                    }
+                    if(lastDate == null || lastDate.compareTo(timeMeasured) < 0)
+                    {
+                        lastDate = timeMeasured;
+                    }
+                    //System.out.println(node.toString());
+                    WeatherObservation observation = new WeatherObservation();
+                    observation.setTimeMeasured(timeMeasured);
+                    observation.setLogIntervalId(node.get("logIntervalId").asInt());
+                    observation.setElementMeasurementTypeId(node.get("elementMeasurementTypeId").asText());
+                    observation.setValue(node.get("value").asDouble());
+                    observations.add(observation);
+                }
+
+            }
+            else
+            {
+                fail("Data input from file is not a JSON array");
+            }
+            config.setConfigParameter("observations", observations);
+
+            
+            return config;
+        } catch (IOException ex) {
+            ex.printStackTrace();
+            return null;
+        } 
+    }
+}

src/test/resources/2015_aas_TMD.json

+[{"timeMeasured": "2015-03-01T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.41025"},
+{"timeMeasured": "2015-03-02T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.87608333333333"},
+{"timeMeasured": "2015-03-03T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.00854166666667"},
+{"timeMeasured": "2015-03-04T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"-1.44675"},
+{"timeMeasured": "2015-03-05T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"0.506208333333333"},
+{"timeMeasured": "2015-03-06T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.055"},
+{"timeMeasured": "2015-03-07T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.29470833333333"},
+{"timeMeasured": "2015-03-08T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.78691666666667"},
+{"timeMeasured": "2015-03-09T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.44725"},
+{"timeMeasured": "2015-03-10T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.848625"},
+{"timeMeasured": "2015-03-11T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.59816666666667"},
+{"timeMeasured": "2015-03-12T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.78283333333333"},
+{"timeMeasured": "2015-03-13T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"0.640458333333333"},
+{"timeMeasured": "2015-03-14T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.04645833333333"},
+{"timeMeasured": "2015-03-15T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.46125"},
+{"timeMeasured": "2015-03-16T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.87916666666667"},
+{"timeMeasured": "2015-03-17T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.67829166666667"},
+{"timeMeasured": "2015-03-18T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.16966666666667"},
+{"timeMeasured": "2015-03-19T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.41620833333333"},
+{"timeMeasured": "2015-03-20T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.30125"},
+{"timeMeasured": "2015-03-21T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"-0.05"},
+{"timeMeasured": "2015-03-22T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"0.198625"},
+{"timeMeasured": "2015-03-23T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"4.522"},
+{"timeMeasured": "2015-03-24T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.11220833333333"},
+{"timeMeasured": "2015-03-25T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.92391666666667"},
+{"timeMeasured": "2015-03-26T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"-0.728625"},
+{"timeMeasured": "2015-03-27T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.34791666666667"},
+{"timeMeasured": "2015-03-28T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.19704166666667"},
+{"timeMeasured": "2015-03-29T00:00:00+01:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.0285"},
+{"timeMeasured": "2015-03-30T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.43166666666667"},
+{"timeMeasured": "2015-03-31T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.33133333333333"},
+{"timeMeasured": "2015-04-01T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.65516666666667"},
+{"timeMeasured": "2015-04-02T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"4.430875"},
+{"timeMeasured": "2015-04-03T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.55983333333333"},
+{"timeMeasured": "2015-04-04T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.77170833333333"},
+{"timeMeasured": "2015-04-05T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"1.38383333333333"},
+{"timeMeasured": "2015-04-06T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.98670833333333"},
+{"timeMeasured": "2015-04-07T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.01775"},
+{"timeMeasured": "2015-04-08T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.91166666666667"},
+{"timeMeasured": "2015-04-09T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.22270833333333"},
+{"timeMeasured": "2015-04-10T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.97625"},
+{"timeMeasured": "2015-04-11T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.57629166666667"},
+{"timeMeasured": "2015-04-12T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.04654166666667"},
+{"timeMeasured": "2015-04-13T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"4.99058333333333"},
+{"timeMeasured": "2015-04-14T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"2.80320833333333"},
+{"timeMeasured": "2015-04-15T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"4.93241666666667"},
+{"timeMeasured": "2015-04-16T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.9735"},
+{"timeMeasured": "2015-04-17T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.18533333333333"},
+{"timeMeasured": "2015-04-18T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.27766666666667"},
+{"timeMeasured": "2015-04-19T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.67808333333333"},
+{"timeMeasured": "2015-04-20T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.619375"},
+{"timeMeasured": "2015-04-21T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.36679166666667"},
+{"timeMeasured": "2015-04-22T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.2030416666667"},
+{"timeMeasured": "2015-04-23T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.283375"},
+{"timeMeasured": "2015-04-24T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.46583333333333"},
+{"timeMeasured": "2015-04-25T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.93266666666667"},
+{"timeMeasured": "2015-04-26T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.83495833333333"},
+{"timeMeasured": "2015-04-27T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"3.63970833333333"},
+{"timeMeasured": "2015-04-28T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"4.384875"},
+{"timeMeasured": "2015-04-29T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.09408333333333"},
+{"timeMeasured": "2015-04-30T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.92683333333333"},
+{"timeMeasured": "2015-05-01T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.25795833333333"},
+{"timeMeasured": "2015-05-02T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.288375"},
+{"timeMeasured": "2015-05-03T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.64233333333333"},
+{"timeMeasured": "2015-05-04T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.635125"},
+{"timeMeasured": "2015-05-05T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.50175"},
+{"timeMeasured": "2015-05-06T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.0941666666667"},
+{"timeMeasured": "2015-05-07T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.244125"},
+{"timeMeasured": "2015-05-08T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.713875"},
+{"timeMeasured": "2015-05-09T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"5.05933333333333"},
+{"timeMeasured": "2015-05-10T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.57520833333333"},
+{"timeMeasured": "2015-05-11T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.462375"},
+{"timeMeasured": "2015-05-12T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.358875"},
+{"timeMeasured": "2015-05-13T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.77766666666667"},
+{"timeMeasured": "2015-05-14T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.607625"},
+{"timeMeasured": "2015-05-15T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.09604166666667"},
+{"timeMeasured": "2015-05-16T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.50833333333333"},
+{"timeMeasured": "2015-05-17T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"6.54245833333333"},
+{"timeMeasured": "2015-05-18T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.69970833333333"},
+{"timeMeasured": "2015-05-19T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.07091666666667"},
+{"timeMeasured": "2015-05-20T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.867875"},
+{"timeMeasured": "2015-05-21T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.208125"},
+{"timeMeasured": "2015-05-22T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.121875"},
+{"timeMeasured": "2015-05-23T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.79"},
+{"timeMeasured": "2015-05-24T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.42295833333333"},
+{"timeMeasured": "2015-05-25T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.12575"},
+{"timeMeasured": "2015-05-26T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.83808333333333"},
+{"timeMeasured": "2015-05-27T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.7490833333333"},
+{"timeMeasured": "2015-05-28T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.59116666666667"},
+{"timeMeasured": "2015-05-29T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.37595833333333"},
+{"timeMeasured": "2015-05-30T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"7.42141666666667"},
+{"timeMeasured": "2015-05-31T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.32220833333333"},
+{"timeMeasured": "2015-06-01T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"10.172875"},
+{"timeMeasured": "2015-06-02T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"8.14145833333333"},
+{"timeMeasured": "2015-06-03T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.1733333333333"},
+{"timeMeasured": "2015-06-04T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.7168333333333"},
+{"timeMeasured": "2015-06-05T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.3925833333333"},
+{"timeMeasured": "2015-06-06T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.4829166666667"},
+{"timeMeasured": "2015-06-07T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.4883333333333"},
+{"timeMeasured": "2015-06-08T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.553375"},
+{"timeMeasured": "2015-06-09T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.049"},
+{"timeMeasured": "2015-06-10T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.6334583333333"},
+{"timeMeasured": "2015-06-11T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.27825"},
+{"timeMeasured": "2015-06-12T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.5879166666667"},
+{"timeMeasured": "2015-06-13T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.7035416666667"},
+{"timeMeasured": "2015-06-14T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.6875"},
+{"timeMeasured": "2015-06-15T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.745"},
+{"timeMeasured": "2015-06-16T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"12.6172083333333"},
+{"timeMeasured": "2015-06-17T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"9.92666666666667"},
+{"timeMeasured": "2015-06-18T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.4045833333333"},
+{"timeMeasured": "2015-06-19T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.51625"},
+{"timeMeasured": "2015-06-20T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"16.45875"},
+{"timeMeasured": "2015-06-21T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.18375"},
+{"timeMeasured": "2015-06-22T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.7395833333333"},
+{"timeMeasured": "2015-06-23T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.4683333333333"},
+{"timeMeasured": "2015-06-24T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"14.41"},
+{"timeMeasured": "2015-06-25T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"11.9941666666667"},
+{"timeMeasured": "2015-06-26T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.3546666666667"},
+{"timeMeasured": "2015-06-27T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"14.6145833333333"},
+{"timeMeasured": "2015-06-28T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.945"},
+{"timeMeasured": "2015-06-29T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.6325"},
+{"timeMeasured": "2015-06-30T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"17.3604166666667"},
+{"timeMeasured": "2015-07-01T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"18.7570833333333"},
+{"timeMeasured": "2015-07-02T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"18.8091666666667"},
+{"timeMeasured": "2015-07-03T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"18.5004166666667"},
+{"timeMeasured": "2015-07-04T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"17.57125"},
+{"timeMeasured": "2015-07-05T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"18.7654166666667"},
+{"timeMeasured": "2015-07-06T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"16.05125"},
+{"timeMeasured": "2015-07-07T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"16.28625"},
+{"timeMeasured": "2015-07-08T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.0458333333333"},
+{"timeMeasured": "2015-07-09T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"13.05375"},
+{"timeMeasured": "2015-07-10T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"14.67875"},
+{"timeMeasured": "2015-07-11T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"14.4104166666667"},
+{"timeMeasured": "2015-07-12T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.665"},
+{"timeMeasured": "2015-07-13T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.2191666666667"},
+{"timeMeasured": "2015-07-14T00:00:00+02:00","elementMeasurementTypeId":"TM", "logIntervalId":"2", "value":"15.345"}]
\ No newline at end of file