pom.xml

@@ -10,7 +10,7 @@
     
     <groupId>no.nibio.vips.model</groupId>
     <artifactId>AlternariaModel</artifactId>
-    <version>1.1.11-SNAPSHOT</version>
+    <version>1.1.14-SNAPSHOT</version>
     <packaging>jar</packaging>
     
     <dependencies>

src/main/resources/no/nibio/vips/model/alternariamodel/texts.properties

@@ -16,7 +16,7 @@
 # 
 
 name=TOMCAST (FAST - Dew) model
-description=<p>{{filename="/images/ef-20200421-altenaria.jpg" description="Photo: Bilde: S. Abrahamsen, NLR"}}</p>\n<p>TOMCAST is based on a model that was originally developed for leaf spot diseases in tomato. The model that is used here is tested and adapted to be used against early blight in potato in Denmark (Alternaria solani). The model calculates daily risk values (DSV: Disease Severity Values) based on temperature and leaf wetness the previous day. DSV represents the risk of attack of early blight the previous 24 hours. Daily values of DSV are accumulated until a threshold value is reached, and treatment is recommended. When a spray is performed and entered into the model, accumulation of DSV is reset and starts over at 0.</p>\n<p>The model will be evaluated in potato and carrots in Norway in 2020, and is only available for private warnings. Based on experience from other countries, the threshold for a warning to be issued is set to 20.</p>\n<h3>When to initiate the model</h3>\n<p>Potato plants vary in susceptibility during the season, and gradually become more susceptible. This means that the requirement for protection against early blight vary accordingly. The model is started when the first symptoms are visible, and first treatment is performed (below 0,1% attack).</p>\n<h3>Interpretation of results</h3>\n<p>The model will be green (no risk) until it reaches 15. From this value the warning will be yellow (possible risk) until the threshold is reached, and the warning turns red (risk of infection).</p>
+description=<h2>Alternaria - TOMCAST (FastDew)</h2>\n<p>The model calculates the risk of infection by leaf blight diseases caused by Alternaria, and is considered to be relevant for early blight of potato (<em>Alternaria solani</em>), Alternaria leaf blight of carrot (<em>Alternaria dauci</em>), and Cercospora leaf blight of carrot (<em>Cercospora carotae</em>).</p>\n<p>{{filename="/images/triple_image.jpg" description="Photos of alternaria"}}</p>\n<p><em>1) Early blight of potato (Alternaria solani). Photo: NIBIO 2) Alternaria leaf blight of carrot (inset closeup show sporulation of Alternaria). Photo: Belachew Asalf, NIBIO 3) Cercospora leaf blight (Cercospora carotae) of carrot. Photo: Belachew Asalf, NIBIO.</em></p>\n<p>The model is meant to be started at the first discovery of symptoms and will then calculate daily risk values (DSV: Disease Severity Value) based on mean temperature and leaf wetness hours for each day (Madden et al. 1978). A daily DSV represents the risk of infection in the preceding 24 hours. Daily DSV-values are summed until a threshold is reached and treatment is recommended. The model is designed so that accumulation of DSV is reset when spraying is carried out, and accumulation starts again from 0.</p>\n<p>The model&rsquo;s standard setup in VIPS is based on the calculation of DSV at temperatures from 13 to 29 &deg;C and leaf wetness hours per day, as defined by Madden et al 1978. The threshold value for calculation of spray intervals is set to DSV = 20.</p>\n<p>The Modified TOMCAST as described for early blight in potato in Danish field trials (Abuley and Nielsen, 2017), can be used by selecting a minimum temperature of 10 &deg;C for calculation of DSV when activating the model. Threshold value for spray interval remains at DSV=20.</p>\n<p>{{filename="/images/image4.png" description="Warning status chart from VIPS"}}</p>\n<p><em>Screenshot from VIPS displaying model output through a season. In this case, three spray times have been registered, each time resetting the accumulated risk value (DSV).</em></p>\n<h3>Model start</h3>\n<p>Potato plants vary in their susceptibility to early blight throughout the season and will become gradually more susceptible. This means the need for protection will vary accordingly. The model is intended to be started when the first symptoms are seen, and the first treatment is carried out (severity below 0.1%).</p>\n<p>This model works best as a private model in VIPS. This can be done with data from a private weather station or by selecting data from a publicly available weather station as listed in VIPS. See <a href="https://www.vips-landbruk.no/information/27/">user guide</a>. When starting the model, the user can decide whether to use the standard setup or select an optional minimum temperature and/or threshold value for DSV.</p>\n<p>Private model outputs with risk alerts will appear along with other model outputs at the right side of the map at the VIPS front page, provided the user is logged in.</p>\n<h3>Model interpretation</h3>\n<p>The model output is green (no risk) at DSV values below 15, yellow (possible risk) from 15 to 20 and red (high risk) above 20. The risk value will be reset when a spray date is entered by the user.</p>\n<h3>Test and validation of the model</h3>\n<h4>In Norway</h4>\n<p>The model has been tested in Norwegian potato and carrot crops since 2020. The threshold value for spray timing is set to DSV=20 based on experiences from other countries, and will be evaluated as part of the considerations in further adaptations to Norwegian conditions (Asalf et al 2024).</p>\n<h4>Internationally</h4>\n<p>TOMCAST is derived from the FAST dew model (Madden et al 1978), originally targeted at predicting early blight, Septoria leaf spot and anthracnose on tomatoes in North-America (Gleason et al 1995). In Denmark, the model is tested and adapted for use against early blight (Alternaria solani) in potato (Abuley and Nielsen 2017). The Danish modified version of the model set the minimum temperature for calculation of DSV to 10 degrees.</p>\n<h3>Contact persons</h3>\n<p><a href="https://nibio.no/en/employees/havard-eikemo">H&aring;vard Eikemo</a> (potato), and <a href="https://nibio.no/en/employees/belachew-asalf-tadesse">Belachew Asalf Tadesse</a> (belachew.asalf.tadesse@nibio.no) (vegetables)</p>\n<h3>References</h3>\n<p>Abuley and Nielsen, 2017. Evaluation of models to control potato early blight (Alternaria solani) in Denmark. Crop Protection, 102, 118-128. DOI: <a href="https://doi.org/10.1016/j.cropro.2017.08.012">https://doi.org/10.1016/j.cropro.2017.08.012</a></p>\n<p>Asalf. B., Eikemo, H., H&oslash;getveit, L-A., Nordskog B., and Hermansen, A. 2024. Evaluating TOMCAST model for predicting timing of fungicide applications to control Alternaria diseases in carrot and potato (Poster abstract). 13th International Epidemiology workshop, 9-12 April, 2024, Foz du Iguacu, Brazil. P. 05. <a href="https://www.vips-landbruk.no/media/attachments/information/Tomcast_poster_Asalf_et_al.pdf">PDF</a></p>\n<p>Bounds, R. S., Podolsky, R. H., &amp; Hausbeck, M. K. 2007. Integrating disease thresholds with TOM-CAST for carrot foliar blight management. Plant disease, 91, 798-804.</p>\n<p>Gleason, M. L. 1995. "Disease warning system."\u202fPlant Disease\u202f79.2: 113.</p>\n<p>Madden, L., S. P. Pennypacker, and A. A. MacNab. 1978. "FAST, a forecast system for Alternaria solani on tomato."\u202fPhytopathology\u202f68.9: 1354-1358.</p>\n<h3>Links for further information</h3>\n<p>Plantevernleksikonet: <a href="https://www.plantevernleksikonet.no/l/oppslag/310/">Alternaria-bladflekk i gulrot</a></p>\n<p>Plantevernleksikonet: <a href="https://www.plantevernleksikonet.no/l/oppslag/1307/">T&oslash;rrflekksjuke i potet</a></p>
 
 statusInterpretation=The model will be green (no risk) until it reaches 15. From this value the warning will be yellow (possible risk) until the threshold is reached, and the warning turns red (risk of infection).
 usage=Description of required input parameters:\n\

src/main/resources/no/nibio/vips/model/alternariamodel/texts_nb.properties

@@ -16,6 +16,6 @@
 # 
 
 name=TOMCAST (FAST - Dew) modell for Alternaria
-description=  <p>{{filename="/images/ef-20200421-altenaria.jpg" description="Photo: Bilde: S. Abrahamsen, NLR"}}</p>\n<p>TOMCAST er basert p&aring; en modell utviklet for varsling av bladflekksjukdommer i tomat. Versjonen som blir brukt her er testet og tilpasset t&oslash;rrflekksjuke i potet (Alternaria solani) i Danmark. Modellen beregner daglige risikoverdier (DSV: Disease Severity Value) basert p&aring; temperatur og bladfuktighet siste d&oslash;gn. DSV representerer risikoen for angrep av t&oslash;rrflekksjuke siste d&oslash;gn. Daglige DSV-verdier blir summert frem til en terskel er n&aring;dd og behandling er anbefalt. Modellen er laget slik at akkumulering av DSV nullstilles n&aring;r spr&oslash;yting gjennomf&oslash;res, og akkumulering starter p&aring; nytt fra 0.</p>\n<p>Modellen er under utpr&oslash;ving i 2020, og vil bli testet b&aring;de i gulrot og i potet. Det vil kun v&aelig;re mulig &aring; starte private varler for denne modellen. Basert p&aring; erfaringer fra andre land er terskelverdien for r&oslash;dt varsel satt til 20.</p>\n<h3>Oppstart av varsel</h3>\n<p>Potetplanter varierer i mottakelighet for t&oslash;rrflekksjuke gjennom sesongen, og de blir gradvis mer og mer mottakelige. Dette betyr at behovet for beskyttelse ogs&aring; varierer tilsvarende. Modellen startes n&aring;r man ser de f&oslash;rste symptomene p&aring; t&oslash;rrflekksjuke og gjennomf&oslash;rer f&oslash;rste behandling (under 0,1% angrep).</p>\n<h3>Tolking av varsel</h3>\n<p>Modellen vil vise gr&oslash;nt (ingen fare) frem til den akkumulerte risikoverdien er 15. Fra denne verdien frem til terskelverdien (20) vil varselet v&aelig;re gult (mulig fare), og deretter g&aring; over til r&oslash;dt (fare).</p>
+description=  <h2>Alternaria - TOMCAST (FastDew)</h2>\n<p>Modellen beregner risiko for angrep av bladflekksjukdom for&aring;rsaket av Alternaria, og anses &aring; v&aelig;re relevant for t&oslash;rrflekksjuke (<em>Alternaria solani</em>) i potet, Alternaria bladflekk (<em>Alternaria dauci</em>) og Cercospora- bladflekk (<em>Cercospora carotae</em>) i gulrot.</p>\n<p>{{filename="/images/triple_image.jpg" description="Photos of alternaria"}}</p>\n<p><em>1) T&oslash;rrflekksjuke i potet (Alternaria solani). Foto: NIBIO. 2) Alternariabladflekk i gulrot (Alternaria dauci) i gulrot. N&aelig;rbildet viser sporulering. Foto: Belachew Asalf, NIBIO. 3) Cercospora bladflekk (Cercospora carotae) i gulrot . Foto: Belachew Asalf, NIBIO</em></p>\n<p>Modellen startes ved f&oslash;rste funn av symptomer, og vil deretter beregne daglige risikoverdier (DSVs: Disease Severity Values) basert p&aring; temperatur og bladfuktighet siste d&oslash;gn (Madden et al. 1978). DSV representerer risikoen for angrep av t&oslash;rrflekksjuke siste d&oslash;gn. Daglige DSV-verdier blir summert frem til en terskel er n&aring;dd og behandling er anbefalt. Modellen er laget slik at akkumulering av DSV nullstilles n&aring;r spr&oslash;yting gjennomf&oslash;res og legges inn i VIPS, og akkumulering starter p&aring; nytt fra 0.</p>\n<p>{{filename="/images/image4.png" description="Varselgraf fra VIPS"}}</p>\n<p><em>Skjermbilde fra VIPS som viser varsler gjennom en sesong. I dette tilfellet er det lagt inn tre spr&oslash;ytetider som vises ved at akkumulert risikoverdi (DSV) nullstilles.</em></p>\n<p>&nbsp;</p>\n<p>Modellens standardoppsett i VIPS er basert p&aring; beregning av DSV ved temperaturer fra 13 til 29 grader, som definert av Madden et al 1978. Terskelverdi for beregning av spr&oslash;yteintervall er satt til DSV = 20.</p>\n<p>Dersom en &oslash;nsker &aring; bruke en Modifisert TOMCAST som beskrevet for t&oslash;rrflekksjuke potet i danske fors&oslash;k (Abuley og Nielsen, 2017), kan bruker selv endre minimumstemperatur for modellen til 10 grader. Terskelverdi for spr&oslash;yteintervall DSV = 20.</p>\n<p>&nbsp;</p>\n<h3>Oppstart av varsel</h3>\n<p>Potetplanter varierer i mottakelighet for t&oslash;rrflekksjuke gjennom sesongen, og de blir gradvis mer og mer mottakelige. Dette betyr at behovet for beskyttelse ogs&aring; varierer tilsvarende. Modellen startes n&aring;r man ser de f&oslash;rste symptomene p&aring; t&oslash;rrflekksjuke og gjennomf&oslash;rer f&oslash;rste behandling (under 0,1% angrep).</p>\n<p>Denne modellen fungerer best som privat varsel. Dette kan gj&oslash;res med data fra private v&aelig;rstasjoner og for v&aelig;rstasjoner som er offentlig tilgjengelige i VIPS. Se\u202f<a href="https://www.vips-landbruk.no/information/27/">brukerveiledning</a>. Ved oppstart av varsel kan bruker selv bestemme om en &oslash;nsker &aring; bruke standard innstilling.</p>\n<p>Dersom en ikke &oslash;nsker &aring; bruke standard oppsett kan bruker selv velge minimumstemperatur og terskelverdi for DSV n&aring;r modellen startes.</p>\n<p>Alternaria-varsel vil komme opp i kolonnen til h&oslash;yre for kartet i VIPS-forsida s&aring; lenge brukeren er logget inn.</p>\n<h3>Tolking av varsel</h3>\n<p>Modellen viser gr&oslash;nt (ingen fare) frem til den akkumulerte risikoverdien er 15, gult (mulig fare) fra 15 til 20, og deretter r&oslash;dt (fare). Risikoverdien nullstilles n&aring;r bruker legger inn en spr&oslash;ytedato i sitt modelloppsett.</p>\n<h3>Utpr&oslash;ving og validering av modellen</h3>\n<h4>Nasjonalt</h4>\n<p>Modellen har v&aelig;rt under utpr&oslash;ving i Norge siden 2020, og blir testet b&aring;de i gulrot og i potet. Basert p&aring; erfaringer fra andre land er terskelverdien for r&oslash;dt varsel satt til DSV = 20. Som del av fors&oslash;kene vil det bli vurdert om terskelverdier b&oslash;r justeres for best mulig tilpasning til norske forhold (Asalf et al 2024).</p>\n<h4>Internasjonalt</h4>\n<p>TOMCAST er basert p&aring; en modell utviklet for varsling av bladflekksjukdommer i tomat, og har sin opprinnelse fra USA (Madden et al 1978). Videre erfaringer med bruk av TOMCAST som varslingsmodell for t&oslash;rrflekksjuke i tomat er oppsummert av Gleason et al (1995). I Danmark er modellen evaluert for bruk i potet, hvor best resultat ble oppn&aring;dd med en modifisert versjon hvor minimumstemperatur ble redusert til 10 grader, med spr&oslash;yteintervall ved 20 DSV.</p>\n<p>Kontaktpersoner: <a href="https://nibio.no/ansatte/havard-eikemo">H&aring;vard Eikemo</a> (potet), og <a href="https://nibio.no/ansatte/belachew-asalf-tadesse">Belachew Asalf Tadesse</a> (gr&oslash;nnsaker)</p>\n<h3>Referanser</h3>\n<p>Abuley and Nielsen, 2017. Evaluation of models to control potato early blight (Alternaria solani) in Denmark. Crop Protection, 102, 118-128. DOI: <a href="https://doi.org/10.1016/j.cropro.2017.08.012">https://doi.org/10.1016/j.cropro.2017.08.012</a></p>\n<p>Asalf. B., Eikemo, H., H&oslash;getveit, L-A., Nordskog B., and Hermansen, A. 2024. Evaluating TOMCAST model for predicting timing of fungicide applications to control Alternaria diseases in carrot and potato (Poster abstract). 13th International Epidemiology workshop, 9-12 April, 2024, Foz du Iguacu, Brazil. P. 05. <a href="https://www.vips-landbruk.no/media/attachments/information/Tomcast_poster_Asalf_et_al.pdf">PDF</a></p>\n<p>Bounds, R. S., Podolsky, R. H., &amp; Hausbeck, M. K. 2007. Integrating disease thresholds with TOM-CAST for carrot foliar blight management. Plant disease, 91, 798-804.</p>\n<p>Gleason, M. L. 1995. "Disease warning system."\u202fPlant Disease\u202f79.2: 113.</p>\n<p>Madden, L., S. P. Pennypacker, and A. A. MacNab. 1978. "FAST, a forecast system for Alternaria solani on tomato."\u202fPhytopathology\u202f68.9: 1354-1358.</p>\n<h3>Lenker til mer informasjon</h3>\n<p>Plantevernleksikonet: <a href="https://www.plantevernleksikonet.no/l/oppslag/310/">Alternaria-bladflekk i gulrot</a></p>\n<p>Plantevernleksikonet: <a href="https://www.plantevernleksikonet.no/l/oppslag/1307/">T&oslash;rrflekksjuke i potet</a></p>
 statusInterpretation=Modellen vil vise gr\u00f8nt (ingen fare) frem til den akkumulerte risikoverdien er 15. Fra denne verdien frem til terskelverdien (20) vil varselet v\u00e6re gult (mulig fare), og deretter g\u00e5 over til r\u00f8dt (fare).
 usage=TODO