Adding util class for Tests

Making Build with dependencies part of every build. This is to make
it work for standalone dev, i.e. model development.

pom.xml

@@ -27,7 +27,6 @@
       <groupId>com.fasterxml.jackson.core</groupId>
       <artifactId>jackson-annotations</artifactId>
       <version>2.4.1</version>
-      <scope>provided</scope>
     </dependency>
     <dependency>
       <groupId>commons-validator</groupId>
@@ -39,7 +38,6 @@
       <groupId>com.fasterxml.jackson.core</groupId>
       <artifactId>jackson-core</artifactId>
       <version>2.4.1</version>
-      <scope>provided</scope>
     </dependency>
     <dependency>
       <groupId>com.fasterxml.jackson.core</groupId>
@@ -114,6 +112,23 @@
           <target>1.8</target>
         </configuration>
       </plugin>
+      <plugin>
+            <artifactId>maven-assembly-plugin</artifactId>
+            <configuration>
+              <descriptorRefs>
+                <descriptorRef>jar-with-dependencies</descriptorRef>
+              </descriptorRefs>
+            </configuration>
+            <executions>
+          <execution>
+            <id>make-assembly</id> <!-- this is used for inheritance merges -->
+            <phase>package</phase> <!-- bind to the packaging phase -->
+            <goals>
+              <goal>single</goal>
+            </goals>
+          </execution>
+        </executions>
+    </plugin>
     </plugins>
   </build>
 </project>

src/main/java/no/nibio/vips/util/test/WeatherDataFileReader.java

+/*
+ * Copyright (c) 2017 NIBIO <http://www.nibio.no/>. 
+ * 
+ * This file is part of VIPSCommon.
+ * VIPSCommon is free software: you can redistribute it and/or modify
+ * it under the terms of the NIBIO Open Source License as published by 
+ * NIBIO, either version 1 of the License, or (at your option) any
+ * later version.
+ * 
+ * VIPSCommon is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * NIBIO Open Source License for more details.
+ * 
+ * You should have received a copy of the NIBIO Open Source License
+ * along with VIPSCommon.  If not, see <http://www.nibio.no/licenses/>.
+ * 
+ */
+
+package no.nibio.vips.util.test;
+
+import com.fasterxml.jackson.core.JsonFactory;
+import com.fasterxml.jackson.core.JsonParser;
+import com.fasterxml.jackson.core.type.TypeReference;
+import com.fasterxml.jackson.databind.JsonNode;
+import com.fasterxml.jackson.databind.MappingJsonFactory;
+import com.fasterxml.jackson.databind.ObjectMapper;
+import java.io.BufferedInputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.util.ArrayList;
+import java.util.Date;
+import java.util.List;
+import no.nibio.vips.entity.ModelConfiguration;
+import no.nibio.vips.entity.WeatherObservation;
+import no.nibio.vips.model.ConfigValidationException;
+
+/**
+ * @copyright 2017 <a href="http://www.nibio.no/">NIBIO</a>
+ * @author Tor-Einar Skog <tor-einar.skog@nibio.no>
+ */
+public class WeatherDataFileReader {
+
+    /**
+     * 
+     * @param weatherDataFileName filename and path on classpath
+     * @param modelId 10 chars ID of model
+     * @return A Model Configuration with weather data. Can be filled with other configuration data
+     * @throws ConfigValidationException 
+     */
+    public ModelConfiguration getModelConfigurationWithWeatherData(String weatherDataFileName, String modelId) throws ConfigValidationException
+    {
+        try {
+            ModelConfiguration config = new ModelConfiguration();
+            config.setModelId(modelId);
+            BufferedInputStream inputStream = new BufferedInputStream(this.getClass().getResourceAsStream(weatherDataFileName));
+            //InputStream i = this.getClass().getResourceAsStream(weatherDataFileName);
+            JsonFactory f = new MappingJsonFactory();
+            JsonParser jp = f.createParser(inputStream);
+            JsonNode all = jp.readValueAsTree();
+            List<WeatherObservation> observations = new ArrayList<>();
+            ObjectMapper mapper = new ObjectMapper();
+
+            Date firstDate = null;
+            Date lastDate = null;
+            if(all.isArray())
+            {
+                for(JsonNode node : all){
+                    Date timeMeasured = (Date)mapper.convertValue(node.get("timeMeasured").asText(), new TypeReference<Date>(){});
+                    if(firstDate == null || firstDate.compareTo(timeMeasured) > 0)
+                    {
+                        firstDate = timeMeasured;
+                    }
+                    if(lastDate == null || lastDate.compareTo(timeMeasured) < 0)
+                    {
+                        lastDate = timeMeasured;
+                    }
+                    //System.out.println(node.toString());
+                    WeatherObservation observation = new WeatherObservation();
+                    observation.setTimeMeasured(timeMeasured);
+                    observation.setLogIntervalId(node.get("logIntervalId").asInt());
+                    observation.setElementMeasurementTypeId(node.get("elementMeasurementTypeId").asText());
+                    observation.setValue(node.get("value").asDouble());
+                    observations.add(observation);
+                }
+
+            }
+            else
+            {
+                throw new ConfigValidationException("Data input from file is not a JSON array");
+            }
+            config.setConfigParameter("observations", observations);
+
+            
+            return config;
+        } catch (IOException ex) {
+            ex.printStackTrace();
+            throw new ConfigValidationException(ex.getMessage());
+        } 
+    }
+}