From df7ac3cd675d7fb24d07a95e42468621bbd4d312 Mon Sep 17 00:00:00 2001
From: Simeon <51403284+simeross@users.noreply.github.com>
Date: Tue, 31 Oct 2023 11:24:38 +0100
Subject: [PATCH] Update variant_classifier.R

---
 R/variant_classifier.R | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/R/variant_classifier.R b/R/variant_classifier.R
index 29a5944..c340ea8 100644
--- a/R/variant_classifier.R
+++ b/R/variant_classifier.R
@@ -134,7 +134,8 @@ variant_classifier <- function(
     ungroup() %>%
     dplyr::filter(rel_abundance > 0)
 
-  aa_info <- find_longest_reading_frames(unlist(unname(clustered_sequences))) %>%
+  aa_info <- find_longest_reading_frames(unlist(unname(
+                Biostrings::DNAStringSetList(clustered_sequences)))) %>%
     mutate(longest_aa_seq = max_width/3) %>%
     select(seqnames, longest_aa_seq)
 
-- 
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