From df7ac3cd675d7fb24d07a95e42468621bbd4d312 Mon Sep 17 00:00:00 2001 From: Simeon <51403284+simeross@users.noreply.github.com> Date: Tue, 31 Oct 2023 11:24:38 +0100 Subject: [PATCH] Update variant_classifier.R --- R/variant_classifier.R | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/R/variant_classifier.R b/R/variant_classifier.R index 29a5944..c340ea8 100644 --- a/R/variant_classifier.R +++ b/R/variant_classifier.R @@ -134,7 +134,8 @@ variant_classifier <- function( ungroup() %>% dplyr::filter(rel_abundance > 0) - aa_info <- find_longest_reading_frames(unlist(unname(clustered_sequences))) %>% + aa_info <- find_longest_reading_frames(unlist(unname( + Biostrings::DNAStringSetList(clustered_sequences)))) %>% mutate(longest_aa_seq = max_width/3) %>% select(seqnames, longest_aa_seq) -- GitLab