diff --git a/Min_test_data/nextflow_results/MinP1831_erik_protein.fa b/Min_test_data/nextflow_results/MinP1831_erik_protein.fa
new file mode 120000
index 0000000000000000000000000000000000000000..55f9c3b6e2a11129eada9ff014f51b917faa6b54
--- /dev/null
+++ b/Min_test_data/nextflow_results/MinP1831_erik_protein.fa
@@ -0,0 +1 @@
+/home/nibio/Documents/Git/DivGene-genome-annotation/work/b2/4d0430cc99d9679f13bbc44fdb2b14/MinP1831_erik_protein.fa
\ No newline at end of file
diff --git a/Min_test_data/nextflow_results/emapper/MinP1831_erik_em.emapper.annotations b/Min_test_data/nextflow_results/emapper/MinP1831_erik_em.emapper.annotations
new file mode 120000
index 0000000000000000000000000000000000000000..a16793174a65face9e9e1e43408a72ea007cca01
--- /dev/null
+++ b/Min_test_data/nextflow_results/emapper/MinP1831_erik_em.emapper.annotations
@@ -0,0 +1 @@
+/home/nibio/Documents/Git/DivGene-genome-annotation/work/3c/48d999464a895324d779655902e4b4/MinP1831_erik_em.emapper.annotations
\ No newline at end of file
diff --git a/Min_test_data/nextflow_results/fixed.gff b/Min_test_data/nextflow_results/fixed.gff
new file mode 120000
index 0000000000000000000000000000000000000000..7530602fd877bb9011ff574c5d2085c893e899ce
--- /dev/null
+++ b/Min_test_data/nextflow_results/fixed.gff
@@ -0,0 +1 @@
+/home/nibio/Documents/Git/DivGene-genome-annotation/work/e3/b57eac02db62ca9e83c859e498918e/fixed.gff
\ No newline at end of file
diff --git a/Min_test_data/nextflow_results/interpro/MinP1831_erik_interpro.xml b/Min_test_data/nextflow_results/interpro/MinP1831_erik_interpro.xml
new file mode 120000
index 0000000000000000000000000000000000000000..8def5190be5819292300f2ed3f2769c84a8aca60
--- /dev/null
+++ b/Min_test_data/nextflow_results/interpro/MinP1831_erik_interpro.xml
@@ -0,0 +1 @@
+/home/nibio/Documents/Git/DivGene-genome-annotation/work/d9/759832a0f6ff7f32cf96c6610b9246/MinP1831_erik_interpro.xml
\ No newline at end of file
diff --git a/effector_annot.r b/effector_annot.r
new file mode 100644
index 0000000000000000000000000000000000000000..d57afb19612dba58393ab17aaf69aa960424a312
--- /dev/null
+++ b/effector_annot.r
@@ -0,0 +1,8 @@
+library(effectR)
+
+# fasta_prot <- seqinr::read.fasta(commandArgs(trailingOnly = TRUE)[1])
+test <- seqinr::read.fasta("Mid_test_data/nextflow_results/MidP1831_erik_protein.fa")
+fasta_prot <- test
+
+rxlr_cand <- regex.search(fasta_prot)
+crn_cand <- regex.search(fasta_prot, motif = "CRN")
\ No newline at end of file
diff --git a/nextflow.config b/nextflow.config
index 50bbaf22bf27e4e11b3570395e6b46c82a59b0c9..2dec088b1bc9eafc7467bb79fcfc881f2a129fe3 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -1,5 +1,5 @@
-params.genome = "MidP1831_erik"
-params.project = "/home/nibio/Documents/Git/DivGene-genome-annotation/Mid_test_data"
+params.genome = "MinP1831_erik"
+params.project = "/home/nibio/Documents/Git/DivGene-genome-annotation/Min_test_data"
 
 profiles {
     conda {
diff --git a/pinf_genome_annotation.nf b/pinf_genome_annotation.nf
index 1ae7ee7b19d7e85fd877756f832ffc55e5b3b1fd..4e25b99adf0ff8b2d7ba48e6714d656388dcbedd 100644
--- a/pinf_genome_annotation.nf
+++ b/pinf_genome_annotation.nf
@@ -80,7 +80,7 @@ publishDir "${params.project}/nextflow_results/interpro", mode: 'symlink'
 ~/interproscan-5.68-100.0/interproscan.sh \
   -i $proteinFasta \
   -f xml \
-  -b "${params.genome}_interpro.xml"
+  -b "${params.genome}_interpro"
 """
 }
 
@@ -113,9 +113,10 @@ funannotate annotate \
 
 workflow {
   def gff_ch = Channel.fromPath(params.genomeGFF)
+  def sp_ch = Channel.value(params.speciesStrain)
   fixGFF(gff_ch)
   extractProteins(params.genomeFasta, fixGFF.out)
   searchAndAnnotateEggnogg(extractProteins.out)
   searchAndAnnotateInterPro(extractProteins.out)
-  funannotateIntegration(fixGFF.out, params.genomeFasta, searchAndAnnotateEggnogg.out, searchAndAnnotateInterPro.out, params.sbt, params.speciesStrain)
+  funannotateIntegration(fixGFF.out, params.genomeFasta, searchAndAnnotateEggnogg.out, searchAndAnnotateInterPro.out, params.sbt, "Pinf")
 }
\ No newline at end of file