From e4de42d6f003beedf9a1b0ed72761191f232d8f9 Mon Sep 17 00:00:00 2001 From: Maciej Wielgosz <maciej.wielgosz@nibio.no> Date: Mon, 17 Oct 2022 10:36:33 +0200 Subject: [PATCH] fine grained protocol partially implemented - no instance yet --- run_all_fine_grained.sh | 18 +++++++++++++----- 1 file changed, 13 insertions(+), 5 deletions(-) diff --git a/run_all_fine_grained.sh b/run_all_fine_grained.sh index 266a717..a96e7f0 100755 --- a/run_all_fine_grained.sh +++ b/run_all_fine_grained.sh @@ -94,9 +94,17 @@ echo "Tiling and tile index generation" python nibio_preprocessing/tiling.py \ -i $data_folder/segmented_point_clouds/ \ -o $data_folder/segmented_point_clouds/tiled \ ---tile_size 5 - -# TODO: remove tiles which not dense enough +--tile_size 10 + +# remove small tiles using nibio_preprocessing/remove_small_tiles.py +for d in $data_folder/segmented_point_clouds/tiled/*; do + echo "Removing small tiles from $d" + python nibio_preprocessing/remove_small_tiles.py \ + --dir $d \ + --tile_index $d/tile_index.dat \ + --min_density 75 \ + --verbose +done # iterate over all the directories in the tiled folder for d in $data_folder/segmented_point_clouds/tiled/*/; do @@ -107,8 +115,8 @@ for d in $data_folder/segmented_point_clouds/tiled/*/; do --batch_size 10 \ --odir $d \ --verbose \ - --tile-index $d/tile_index.dat \ - --buffer 0.5 + # --tile-index $d/tile_index.dat \ + # --buffer 2 done done -- GitLab