From e479d0b0b7b4cda81c4a559d8f6a7a21bf58ffb4 Mon Sep 17 00:00:00 2001
From: Maciej Wielgosz <maciej.wielgosz@nibio.no>
Date: Fri, 27 Jan 2023 19:28:42 +0100
Subject: [PATCH] update for ground adding in optimization tls.sh

---
 optimization_pipeline/tls.sh | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/optimization_pipeline/tls.sh b/optimization_pipeline/tls.sh
index 996c1fd..2e3a19a 100755
--- a/optimization_pipeline/tls.sh
+++ b/optimization_pipeline/tls.sh
@@ -3,7 +3,7 @@
 ############################ parameters #################################################
 # General parameters
 CLEAR_INPUT_FOLDER=1  # 1: clear input folder, 0: not clear input folder
-CONDA_ENV="pdal-env-1" # conda environment for running the pipeline
+CONDA_ENV="pdal-env" # conda environment for running the pipeline
 
 # Tiling parameters
 data_folder="" # path to the folder containing the data
@@ -201,8 +201,6 @@ for segmented_point_cloud_in_ply in $data_folder/results/segmented_point_clouds/
     --writers.las.extra_dims=all
 done
 
-python nibio_preprocessing/add_ground_to_inst_seg_folders.py --sem_seg_folder sample_playground/results/segmented_point_clouds/ --inst_seg_folder sample_playground/results/instance_segmented_point_clouds/ --output_folder sample_playground/instance_seg_with_ground --verbose
-
 # create the instance segmented point clouds with ground folder
 mkdir -p $data_folder/results/instance_segmented_point_clouds_with_ground
 
-- 
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