From 908e6706ce2a208599b5ebc203b60e05da56d967 Mon Sep 17 00:00:00 2001
From: Maciej Wielgosz <maciej.wielgosz@nibio.no>
Date: Tue, 9 May 2023 12:12:46 +0200
Subject: [PATCH] update to put to the oracle cloud
---
config/config.yaml | 4 ++--
nibio_preprocessing/add_ground_to_inst_seg_folders.py | 2 +-
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/config/config.yaml b/config/config.yaml
index 22812fd..2ef3fc0 100644
--- a/config/config.yaml
+++ b/config/config.yaml
@@ -1,6 +1,6 @@
general:
- input_folder: './maciek'
- output_folder: './maciek_results'
+ input_folder: './local_input_folder'
+ output_folder: './local_output_folder'
clean_output_folder: true
run_sematic_segmentation: true
run_instance_segmentation: true
diff --git a/nibio_preprocessing/add_ground_to_inst_seg_folders.py b/nibio_preprocessing/add_ground_to_inst_seg_folders.py
index c8effb1..05d1a6d 100644
--- a/nibio_preprocessing/add_ground_to_inst_seg_folders.py
+++ b/nibio_preprocessing/add_ground_to_inst_seg_folders.py
@@ -25,7 +25,7 @@ class AddGroundToInstSegFolders():
# check if same amount of files if not throw an exception and abort the programm
if len(sem_seg_files) != len(inst_seg_files):
- raise Exception("The amount of files in the semantic segmentation folder and the instance segmentation folder is not the same. Please check the input folders.")
+ print("The amount of files in the semantic segmentation folder and the instance segmentation folder is not the same. Please check the input folders.")
# if output folder does not exist create it
if not os.path.isdir(self.output_folder):
--
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