From 81f26173b88a7b529c648f0c0e6bc4dbb90c454f Mon Sep 17 00:00:00 2001
From: Maciej Wielgosz <maciej.wielgosz@nibio.no>
Date: Wed, 21 Jun 2023 08:24:12 +0200
Subject: [PATCH] zipping the output for the oracle cloud
---
run_oracle_wrapper.py | 13 +++++++++----
1 file changed, 9 insertions(+), 4 deletions(-)
diff --git a/run_oracle_wrapper.py b/run_oracle_wrapper.py
index 097808e..4844d69 100644
--- a/run_oracle_wrapper.py
+++ b/run_oracle_wrapper.py
@@ -26,14 +26,14 @@ def run_oracle_wrapper(path_to_config_file):
client = ObjectStorageClient(config)
# read system environment variables
- # input_location = os.environ['OBJ_INPUT_LOCATION']
- # output_location = os.environ['OBJ_OUTPUT_LOCATION']
+ input_location = os.environ['OBJ_INPUT_LOCATION']
+ output_location = os.environ['OBJ_OUTPUT_LOCATION']
# input_location = "oci://maciej-seg-test-in@axqlz2potslu/las_files"
# output_location = "oci://maciej-seg-test-out@axqlz2potslu"
- input_location = "oci://forestsens_temp@axqlz2potslu/acc_6/batch_274/original_las_files"
- output_location = "oci://maciej-seg-test-out@axqlz2potslu"
+ # input_location = "oci://forestsens_temp@axqlz2potslu/acc_6/batch_274/original_las_files"
+ # output_location = "oci://maciej-seg-test-out@axqlz2potslu"
# doing for the input
@@ -129,6 +129,11 @@ def run_oracle_wrapper(path_to_config_file):
else:
path_to_the_output_folder = config_flow_params['general']['output_folder']
+ # zip the files in path_to_the_output_folder
+ zip_file_name = 'results'
+ shutil.make_archive(zip_file_name, 'zip', path_to_the_output_folder) # this will be done in the current folder
+ shutil.copy('results.zip', path_to_the_output_folder)
+
# get list of files in the output folder
list_of_files = os.listdir(path_to_the_output_folder)
--
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