diff --git a/README.md b/README.md index 9b107e5ff1a75e6f93b82f26b286dc8d5d831236..21b81b8b4019d7ce98d1f04dee709d6b5cd8f913 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,51 @@ # SeptoriaApiicolaModel -This repository contains the implementation of the Septoria apiicola model. +<img src="src/main/resources/images/septoriaapiicola.jpg" title="S. apiicola in celery (Photo: E. Fløistad, NIBIO)"/> +<p>This model is based on a calculation of how leaf wetness periods influence +infection of celery by <em>Septoria apiicola</em> in susceptible host plants.<p> +<p>Forecasts of infection risk are given after a minimum of 12 consecutive hours +of leaf wetness. The wet periods are calculated from sensors placed 30 cm above +ground. If such a sensor is not available, data from leaf wetness sensors placed +2 m above ground are used.</p> +<p>The model is developed in Michigan, USA and published by Lacy, 1994.</p> +<p>It is generally assumed that this model has additional relevance for Septoria petroselini in parsley.</p> +<h3>Warning interpretation</h3> +<p><em>The following recommendations are provided for the Norwegian celery production.</em></p> +<p>The model is a tool to decide when to start looking for initial disease +outbreaks. It is not considered accurate enough to provide reliable advice for +timing of fungicide applications under Norwegian conditions. </p> +<p>If inoculum is present, infections are expected to develop 7-14 days after +the first infection risk periods (yellow or red warnings). It is recommended to +intensify field inspections after periods with risk warnings to detect early +infections of <em>Septoria apiicola</em>. </p> +<ul> +<li>Green: No risk of infection.</li> +<li>Yellow: Weather conditions favorable for infection risk. No known sources of +inoculum in the region.</li> +<li>Red: Risk of infection and infections of Septoria late blight has been +reported in the nearby region. Disease reports and field inspections are +performed in collaboration with advisors in the Norwegian Agricultural Advisory service.</li> +</ul> +<p>Graph legend: Blue bars indicate periods of at least 12 consecutive hours of +leaf wetness. Black bar indicate date of first field observation of Septoria late +blight.</p> +<h3>Forecast season (Norway only)</h3> +<p>In Norway this model is generally started June 1 and ends September 30. </p> +<p>The model is running on all weather stations located in regions of commercial celery production.</p> +<h3>Model validation</h3> +<h4>Norway</h4> +<p>Validation of this model under Norwegian conditions is ongoing. The current +recommendation for this model is as a tool for timing of field inspections. </p> +<p>Studies of weather conditions, spore production and infection events have been +carried out in field trials at Ås from 2012-2016. Preliminary results indicate a +good fit, although some adjustments could improve the model, particularly in +connection with rain events (Nordskog and Le, 2014). </p> +<h4>Internationally</h4> +<p>The model is developed in Michigan, USA and published by Lacy (1994)</p> +<h3>References</h3> +<p>Lacy, M.L. 1994. Influence of wetness periods on infection of celery by +<em>Septoria apiicola</em> and use in timing sprays for control. Plant Disease 78, 975-979.</p> +<p>Nordskog, B. og Le, V.H. 2015. Varsling av selleribladflekk. Gartneryrket nr 6, s14-15.</p> ### Development diff --git a/pom.xml b/pom.xml index 052d0a69014d40731bb1c235c4e5363f1a436d26..a60be7edf478cbb38a8991b54bf0799eb588a324 100755 --- a/pom.xml +++ b/pom.xml @@ -11,14 +11,14 @@ <groupId>no.nibio.vips.model</groupId> <artifactId>SeptoriaApiicolaModel</artifactId> - <version>1.1.2</version> + <version>1.1.3-SNAPSHOT</version> <packaging>jar</packaging> <dependencies> <dependency> <groupId>no.nibio.vips</groupId> <artifactId>VIPSCommon</artifactId> - <version>2.0.1</version> + <version>2.0.2</version> </dependency> <dependency> <groupId>junit</groupId> diff --git a/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/DataMatrix.java b/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/DataMatrix.java index 7fd0de50e0ec6280b57023193d7c3eded435824d..077dc2db012759ec7733129794b48379d5cbe7c1 100755 --- a/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/DataMatrix.java +++ b/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/DataMatrix.java @@ -1,7 +1,6 @@ /* * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. - * - * This file is part of LygusRugulipennisModel. + * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published by * the Free Software Foundation, either version 3 of the License, or @@ -14,7 +13,7 @@ * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <https://www.gnu.org/licenses/>. - * + * */ package no.nibio.vips.model.septoriaapiicolamodel; diff --git a/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModel.java b/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModel.java index 89a4f61bb21d04922e695f4c2a8082043bae3f73..08a56fd35848b3363562d1e5392e3309baadfde7 100755 --- a/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModel.java +++ b/src/main/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModel.java @@ -1,7 +1,6 @@ /* - * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. - * - * This file is part of LygusRugulipennisModel. + * Copyright (c) 2018 NIBIO <http://www.nibio.no/>. + * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published by * the Free Software Foundation, either version 3 of the License, or @@ -14,7 +13,7 @@ * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <https://www.gnu.org/licenses/>. - * + * */ package no.nibio.vips.model.septoriaapiicolamodel; @@ -138,21 +137,23 @@ public class SeptoriaApiicolaModel extends I18nImpl implements Model{ @Override public String getLicense() { return "\n" + - "Copyright (c) 2016 NIBIO <http://www.nibio.no/>. \n" + - "\n" + - "This file is part of SeptoriaApiicolaModel.\n" + - "SeptoriaApiicolaModel is free software: you can redistribute it and/or modify\n" + - "it under the terms of the NIBIO Open Source License as published by \n" + - "NIBIO, either version 1 of the License, or (at your option) any\n" + - "later version.\n" + - "\n" + - "SeptoriaApiicolaModel is distributed in the hope that it will be useful,\n" + - "but WITHOUT ANY WARRANTY; without even the implied warranty of\n" + - "MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\n" + - "NIBIO Open Source License for more details.\n" + - "\n" + - "You should have received a copy of the NIBIO Open Source License\n" + - "along with SeptoriaApiicolaModel. If not, see <http://www.nibio.no/licenses/>."; + "/*\n" + + " * Copyright (c) 2018 NIBIO <http://www.nibio.no/>. \n" + + " *\n" + + " * This program is free software: you can redistribute it and/or modify\n" + + " * it under the terms of the GNU Affero General Public License as published by\n" + + " * the Free Software Foundation, either version 3 of the License, or\n" + + " * (at your option) any later version.\n" + + " *\n" + + " * This program is distributed in the hope that it will be useful,\n" + + " * but WITHOUT ANY WARRANTY; without even the implied warranty of\n" + + " * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\n" + + " * GNU Affero General Public License for more details.\n" + + " *\n" + + " * You should have received a copy of the GNU Affero General Public License\n" + + " * along with this program. If not, see <https://www.gnu.org/licenses/>.\n" + + " *\n" + + " */"; } @Override diff --git a/src/test/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModelTest.java b/src/test/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModelTest.java index 24e2c2fca3b0625984fe171acafce3e36e3fcba3..ccc384f04361e32a6e0c625506754f793427407b 100755 --- a/src/test/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModelTest.java +++ b/src/test/java/no/nibio/vips/model/septoriaapiicolamodel/SeptoriaApiicolaModelTest.java @@ -1,7 +1,6 @@ /* * Copyright (c) 2016 NIBIO <http://www.nibio.no/>. - * - * This file is part of LygusRugulipennisModel. + * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published by * the Free Software Foundation, either version 3 of the License, or @@ -14,7 +13,7 @@ * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <https://www.gnu.org/licenses/>. - * + * */ package no.nibio.vips.model.septoriaapiicolamodel;