diff --git a/.gitignore b/.gitignore index 8b440b9e3e4709580090b0e5789a2fdf72cb0304..047415d15e7bcbe6744d3867d05eebe8b710a70f 100755 --- a/.gitignore +++ b/.gitignore @@ -4,3 +4,4 @@ jbossmodule/ /nbproject/ *~ .idea/ +/VIPSCommon.iml diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 2dd50db0c0cd856a945ee4c36a6f74c279dcbd8a..831807128236457772aede35f6c1576764131668 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -1,4 +1,8 @@ -image: openjdk:11-jdk +include: + - project: 'VIPS/vips-common-config' + file: '/gitlab-ci-vips-libraries.yml' + ref: main + stages: - build - test @@ -13,10 +17,6 @@ stages: - models-8 variables: - MAVEN_CLI_OPTS: "-s ci_settings.xml --batch-mode" - MAVEN_OPTS: "-Dmaven.repo.local=.m2/repository -Dmaven.artifact.threads=10" - MAIN_BRANCH: "main" - RELEASE_BRANCH: "release" ALTERNARIA_PROJECT_ID: "173" APPLESCABM_PROJECT_ID: "20" BARLEYNETB_PROJECT_ID: "21" @@ -40,45 +40,14 @@ variables: SEPAPIICOL_PROJECT_ID: "39" SEPTORIAHU_PROJECT_ID: "65" SEPTREFHUM_PROJECT_ID: "135" -cache: - paths: - - .m2/repository/ - -build: - stage: build - script: - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS package - tags: - - vips-java - -test: - stage: test - script: - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS test - tags: - - vips-java - -deploy-snapshot: - stage: deploy - script: - - export VERSION=$(./mvnw --batch-mode --no-transfer-progress --non-recursive help:evaluate -Dexpression=project.version | grep -v "\[.*") - - if ! [[ $VERSION =~ .*SNAPSHOT ]]; then exit 1; fi - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS deploy -DskipTests - - echo "VERSION=$VERSION" >> build.env - artifacts: - reports: - dotenv: build.env - tags: - - vips-java - rules: - - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' # Runs after new SNAPSHOT is deployed to package registry. Triggers job on main branch in model repo, # which builds model with the new version of VIPSCommon. This pipeline fails if model build fails. verify_model_ALTERNARIA: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_ALTERNARIA" -t $MAIN_BRANCH $ALTERNARIA_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -90,8 +59,9 @@ verify_model_ALTERNARIA: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_APPLESCABM: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_APPLESCABM" -t $MAIN_BRANCH $APPLESCABM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -103,8 +73,9 @@ verify_model_APPLESCABM: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_BARLEYNETB: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_BARLEYNETB" -t $MAIN_BRANCH $BARLEYNETB_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -116,8 +87,9 @@ verify_model_BARLEYNETB: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_BREMIALACT: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_BREMIALACT" -t $MAIN_BRANCH $BREMIALACT_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -129,8 +101,9 @@ verify_model_BREMIALACT: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_DELIARADIC: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DELIARADIC" -t $MAIN_BRANCH $DELIARADIC_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -142,8 +115,9 @@ verify_model_DELIARADIC: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_DELIARFOBS: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DELIARFOBS" -t $MAIN_BRANCH $DELIARFOBS_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -155,8 +129,9 @@ verify_model_DELIARFOBS: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_DOWNCASTMO: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DOWNCASTMO" -t $MAIN_BRANCH $DOWNCASTMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -168,8 +143,9 @@ verify_model_DOWNCASTMO: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_FAWMODEL01: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_FAWMODEL01" -t $MAIN_BRANCH $FAWMODEL01_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -181,8 +157,9 @@ verify_model_FAWMODEL01: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_FINNCEREAL: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_FINNCEREAL" -t $MAIN_BRANCH $FINNCEREAL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -194,8 +171,9 @@ verify_model_FINNCEREAL: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_GRASSDRYMO: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_GRASSDRYMO" -t $MAIN_BRANCH $GRASSDRYMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -207,8 +185,9 @@ verify_model_GRASSDRYMO: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_LEAFBLOTCH: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_LEAFBLOTCH" -t $MAIN_BRANCH $LEAFBLOTCH_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -220,8 +199,9 @@ verify_model_LEAFBLOTCH: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_LYGUSRUGUL: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_LYGUSRUGUL" -t $MAIN_BRANCH $LYGUSRUGUL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -233,8 +213,9 @@ verify_model_LYGUSRUGUL: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_MAIZEPHENO: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_MAIZEPHENO" -t $MAIN_BRANCH $MAIZEPHENO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -246,8 +227,9 @@ verify_model_MAIZEPHENO: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_MAMESTRABR: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_MAMESTRABR" -t $MAIN_BRANCH $MAMESTRABR_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -259,8 +241,9 @@ verify_model_MAMESTRABR: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_NAERSTADMO: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_NAERSTADMO" -t $MAIN_BRANCH $NAERSTADMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -272,8 +255,9 @@ verify_model_NAERSTADMO: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_NEGPROGMOD: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_NEGPROGMOD" -t $MAIN_BRANCH $NEGPROGMOD_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -285,8 +269,9 @@ verify_model_NEGPROGMOD: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_OATFLOWERM: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_OATFLOWERM" -t $MAIN_BRANCH $OATFLOWERM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -298,8 +283,9 @@ verify_model_OATFLOWERM: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_PSILAROBSE: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_PSILAROBSE" -t $MAIN_BRANCH $PSILAROBSE_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -311,8 +297,9 @@ verify_model_PSILAROBSE: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_PSILARTEMP: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_PSILARTEMP" -t $MAIN_BRANCH $PSILARTEMP_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -324,8 +311,9 @@ verify_model_PSILARTEMP: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_ROUGHAGENU: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_ROUGHAGENU" -t $MAIN_BRANCH $ROUGHAGENU_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -337,8 +325,9 @@ verify_model_ROUGHAGENU: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_SEPAPIICOL: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPAPIICOL" -t $MAIN_BRANCH $SEPAPIICOL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -350,8 +339,9 @@ verify_model_SEPAPIICOL: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_SEPTORIAHU: - stage: models-8 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-8 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPTORIAHU" -t $MAIN_BRANCH $SEPTORIAHU_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -363,8 +353,9 @@ verify_model_SEPTORIAHU: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' verify_model_SEPTREFHUM: - stage: models-8 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-8 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPTREFHUM" -t $MAIN_BRANCH $SEPTREFHUM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="verify" @@ -375,60 +366,13 @@ verify_model_SEPTREFHUM: rules: - if: '$CI_COMMIT_REF_NAME == $MAIN_BRANCH' -deploy-release: - stage: deploy - script: - # For debugging git interaction - #- export GIT_TRACING=2 - #- export GIT_CURL_VERBOSE=1 - - git config --global user.name "${GITLAB_USER_NAME}" - - git config --global user.email "${GITLAB_USER_EMAIL}" - - # Use access token given by CI/CD variable ACCESS_TOKEN to authenticate - - export NEW_REPO_URL=https://root:$ACCESS_TOKEN@$CI_SERVER_HOST/$CI_PROJECT_PATH.git - - git remote set-url --push origin $NEW_REPO_URL - - git fetch origin --prune --prune-tags - - # Checkout release branch, set release version and deploy. Commit, tag and push. - - git checkout $RELEASE_BRANCH - - git status - - git reset --hard origin/$RELEASE_BRANCH - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS validate -DremoveSnapshot - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS deploy -DskipTests - - export RELEASE_VERSION=$(./mvnw --batch-mode --no-transfer-progress --non-recursive help:evaluate -Dexpression=project.version | grep -v "\[.*") - - if [[ $RELEASE_VERSION =~ .*SNAPSHOT ]]; then exit 1; fi - - export RELEASE_TAG="v${RELEASE_VERSION}" - - git add pom.xml - - git commit -m "[ci skip] Set release version ${RELEASE_VERSION}" - - git tag -a $RELEASE_TAG -m "Tag release ${RELEASE_TAG}" - - git push origin $RELEASE_TAG - - git push origin $RELEASE_BRANCH - - # Checkout main branch, merge release branch. Push commit. - - git fetch - - git checkout $MAIN_BRANCH - - git reset --hard origin/$MAIN_BRANCH - - git merge -m "[ci skip] Merge ${RELEASE_BRANCH}" --no-ff $RELEASE_BRANCH - - ./mvnw $MAVEN_CLI_OPTS $MAVEN_OPTS validate -DbumpPatch - - export SNAPSHOT_VERSION=$(./mvnw --batch-mode --no-transfer-progress --non-recursive help:evaluate -Dexpression=project.version | grep -v "\[.*") - - git add pom.xml - - git commit -m "[ci skip] Set snapshot version ${SNAPSHOT_VERSION}" - - git push origin $MAIN_BRANCH - - echo "VERSION=$RELEASE_VERSION" >> build.env - artifacts: - reports: - dotenv: build.env - tags: - - vips-java - rules: - - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' - # Runs after new release is deployed to package registry. Triggers job on main branch in model repo, # which builds model with the new version of VIPSCommon, and releases a new snapshot version of the model. update_model_ALTERNARIA: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_ALTERNARIA" -t $MAIN_BRANCH $ALTERNARIA_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -440,8 +384,9 @@ update_model_ALTERNARIA: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_APPLESCABM: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_APPLESCABM" -t $MAIN_BRANCH $APPLESCABM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -453,8 +398,9 @@ update_model_APPLESCABM: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_BARLEYNETB: - stage: models-1 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-1 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_BARLEYNETB" -t $MAIN_BRANCH $BARLEYNETB_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -466,8 +412,9 @@ update_model_BARLEYNETB: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_BREMIALACT: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_BREMIALACT" -t $MAIN_BRANCH $BREMIALACT_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -479,8 +426,9 @@ update_model_BREMIALACT: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_DELIARADIC: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DELIARADIC" -t $MAIN_BRANCH $DELIARADIC_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -492,8 +440,9 @@ update_model_DELIARADIC: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_DELIARFOBS: - stage: models-2 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-2 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DELIARFOBS" -t $MAIN_BRANCH $DELIARFOBS_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -505,8 +454,9 @@ update_model_DELIARFOBS: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_DOWNCASTMO: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_DOWNCASTMO" -t $MAIN_BRANCH $DOWNCASTMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -518,8 +468,9 @@ update_model_DOWNCASTMO: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_FAWMODEL01: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_FAWMODEL01" -t $MAIN_BRANCH $FAWMODEL01_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -531,8 +482,9 @@ update_model_FAWMODEL01: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_FINNCEREAL: - stage: models-3 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-3 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_FINNCEREAL" -t $MAIN_BRANCH $FINNCEREAL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -544,8 +496,9 @@ update_model_FINNCEREAL: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_GRASSDRYMO: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_GRASSDRYMO" -t $MAIN_BRANCH $GRASSDRYMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -557,8 +510,9 @@ update_model_GRASSDRYMO: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_LEAFBLOTCH: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_LEAFBLOTCH" -t $MAIN_BRANCH $LEAFBLOTCH_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -570,8 +524,9 @@ update_model_LEAFBLOTCH: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_LYGUSRUGUL: - stage: models-4 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-4 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_LYGUSRUGUL" -t $MAIN_BRANCH $LYGUSRUGUL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -583,8 +538,9 @@ update_model_LYGUSRUGUL: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_MAIZEPHENO: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_MAIZEPHENO" -t $MAIN_BRANCH $MAIZEPHENO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -596,8 +552,9 @@ update_model_MAIZEPHENO: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_MAMESTRABR: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_MAMESTRABR" -t $MAIN_BRANCH $MAMESTRABR_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -609,8 +566,9 @@ update_model_MAMESTRABR: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_NAERSTADMO: - stage: models-5 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-5 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_NAERSTADMO" -t $MAIN_BRANCH $NAERSTADMO_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -622,8 +580,9 @@ update_model_NAERSTADMO: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_NEGPROGMOD: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_NEGPROGMOD" -t $MAIN_BRANCH $NEGPROGMOD_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -635,8 +594,9 @@ update_model_NEGPROGMOD: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_OATFLOWERM: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_OATFLOWERM" -t $MAIN_BRANCH $OATFLOWERM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -648,8 +608,9 @@ update_model_OATFLOWERM: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_PSILAROBSE: - stage: models-6 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-6 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_PSILAROBSE" -t $MAIN_BRANCH $PSILAROBSE_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -661,8 +622,9 @@ update_model_PSILAROBSE: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_PSILARTEMP: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_PSILARTEMP" -t $MAIN_BRANCH $PSILARTEMP_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -674,8 +636,9 @@ update_model_PSILARTEMP: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_ROUGHAGENU: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_ROUGHAGENU" -t $MAIN_BRANCH $ROUGHAGENU_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -687,8 +650,9 @@ update_model_ROUGHAGENU: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_SEPAPIICOL: - stage: models-7 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-7 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPAPIICOL" -t $MAIN_BRANCH $SEPAPIICOL_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -700,8 +664,9 @@ update_model_SEPAPIICOL: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_SEPTORIAHU: - stage: models-8 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-8 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPTORIAHU" -t $MAIN_BRANCH $SEPTORIAHU_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" @@ -713,8 +678,9 @@ update_model_SEPTORIAHU: - if: '$CI_COMMIT_REF_NAME == $RELEASE_BRANCH' update_model_SEPTREFHUM: - stage: models-8 image: registry.gitlab.com/finestructure/pipeline-trigger + stage: models-8 + before_script: [] script: - apk add --no-cache openjdk11 - trigger -h gitlab.nibio.no -a "$CICD_API_TOKEN" -p "$ACCESS_TOKEN_SEPTREFHUM" -t $MAIN_BRANCH $SEPTREFHUM_PROJECT_ID -e VERSION=$VERSION -e PURPOSE="update" diff --git a/README.md b/README.md index 86cce2925251c12b85604c7c8605914d2d51743f..3bc42308ba62aec392b5ab6768b77cd1338340d5 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,8 @@ This is a jar file that contains the entities and util classes that are used throughout the VIPS system ## Requirements -* Java >= 14 - +* Java >= 14 +* ## Development + diff --git a/ci_settings.xml b/ci_settings.xml deleted file mode 100644 index da49fc0ffec4b5da556e6482d8f903129998bd81..0000000000000000000000000000000000000000 --- a/ci_settings.xml +++ /dev/null @@ -1,16 +0,0 @@ -<settings xmlns="http://maven.apache.org/SETTINGS/1.1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" - xsi:schemaLocation="http://maven.apache.org/SETTINGS/1.1.0 http://maven.apache.org/xsd/settings-1.1.0.xsd"> - <servers> - <server> - <id>gitlab-maven</id> - <configuration> - <httpHeaders> - <property> - <name>Job-Token</name> - <value>${CI_JOB_TOKEN}</value> - </property> - </httpHeaders> - </configuration> - </server> - </servers> -</settings> \ No newline at end of file diff --git a/pom.xml b/pom.xml index 558fa2352b5fafc36fd066b02db47b3fb2a3f8b7..c83b890a867459902fb6085d7f590b0b17eb67b5 100755 --- a/pom.xml +++ b/pom.xml @@ -5,22 +5,16 @@ <parent> <groupId>no.nibio.vips</groupId> <artifactId>vips-parent-pom</artifactId> - <version>1.0.2</version> + <version>1.0.7</version> </parent> - <groupId>no.nibio.vips</groupId> <artifactId>VIPSCommon</artifactId> - <version>2.0.12</version> + <version>2.0.13-SNAPSHOT</version> <packaging>jar</packaging> <name>VIPSCommon</name> <url>https://gitlab.nibio.no/VIPS/VIPSCommon</url> - <properties> - <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding> - <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding> - </properties> - <dependencies> <dependency> <groupId>junit</groupId> @@ -153,10 +147,6 @@ </dependency> </dependencies> <repositories> - <repository> - <id>gitlab-maven</id> - <url>https://gitlab.nibio.no/api/v4/projects/401/packages/maven</url> - </repository> <repository> <id>bedatadriven</id> <name>bedatadriven public repo</name>